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Os11g0266500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Disease resistance protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.09 (0.0272) R2 : 0.372
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.61 (0.0995) R2dE : 0.431 R2E : 0.186
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.573 (0.0613) R2dN8 : 0.187 R2N8 : -0.0591
σ : 0.5
deviance : 115.07
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 10.2
memory length : 9813
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
82.36 0.426 6.07 0.255 0.689 -1.22 -1.54 3.56 0.351 15.1 26.03 1496 -- --
85.94 0.432 6.19 -0.653 0.59 -0.838 -1.69 -- 0.132 15.2 26.1 1353 -- --
89.12 0.44 6.08 0.062 0.762 -1.24 -- 3.59 0.36 15.7 25.65 1763 -- --
93.11 0.449 6.19 -0.708 0.786 -0.915 -- -- 0.143 15.5 25.81 1771 -- --
108.63 0.485 6.04 0.349 -- -1.27 -- 3.29 0.545 -- 22.26 2608 -- --
116.9 0.507 6.2 -0.972 0.716 -- -1.43 -- 0.0815 15 -- -- -- --
123.65 0.521 6.21 -1 0.716 -- -- -- 0.0735 15.2 -- -- -- --
115.92 0.501 6.1 -0.123 -- -1.44 -- -- 0.556 -- 16.13 11127 -- --
105.32 0.478 6.17 -- 0.804 -1.14 -- -- 0.248 15.8 25.3 1790 -- --
152.76 0.578 6.21 -1.03 -- -- -- -- 0.0548 -- -- -- -- --
150.21 0.573 6.18 -- 0.736 -- -- -- 0.185 15.2 -- -- -- --
115.07 0.5 6.09 -- -- -1.61 -- -- 0.573 -- 10.2 9813 -- --
180.98 0.628 6.18 -- -- -- -- -- 0.17 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 77.10 temperature 10 270 > th dose dependent rect. 1 19
4 78.08 humidity 70 14400 < th dose dependent rect. 17 15
5 78.18 humidity 70 14400 < th dose dependent rect. 17 3
18 78.34 temperature 10 270 > th dose dependent rect. 24 21
21 78.60 humidity 90 14400 > th dose dependent rect. 18 7
23 78.70 humidity 90 14400 > th dose dependent rect. 21 3
30 78.96 radiation 1 14400 > th dose independent rect. 5 1
35 79.15 radiation 1 14400 < th dose independent rect. 5 1
55 79.83 humidity 90 14400 > th dose dependent sin 17 NA
77 80.20 radiation 1 14400 < th dose independent rect. 21 9
78 80.21 radiation 1 14400 < th dose independent rect. 23 7
92 80.33 temperature 25 1440 > th dose dependent rect. 17 2
108 80.51 humidity 90 14400 < th dose independent rect. 21 2
111 80.52 wind 1 43200 > th dose dependent rect. 4 11
116 80.57 wind 9 43200 < th dose dependent rect. 4 11
121 80.63 wind 9 43200 < th dose independent rect. 2 13
127 80.73 wind 3 43200 > th dose independent rect. 11 1
128 80.73 humidity 60 14400 < th dose independent rect. 16 4
130 80.75 humidity 80 43200 < th dose dependent rect. 22 1
133 80.78 humidity 60 14400 > th dose independent rect. 17 11
151 80.82 wind 3 43200 < th dose independent rect. 11 1
159 80.85 humidity 60 14400 > th dose independent rect. 17 3
164 80.89 wind 7 43200 > th dose dependent rect. 2 14
166 80.90 humidity 80 14400 > th dose dependent rect. 18 2
168 80.91 humidity 60 14400 > th dose independent rect. 17 6
177 80.98 humidity 90 14400 > th dose independent rect. 18 6
178 80.98 wind 7 43200 > th dose dependent rect. 24 16
185 81.02 humidity 90 14400 < th dose independent rect. 17 7
199 81.05 wind 7 43200 > th dose dependent rect. 9 5
211 81.10 wind 3 43200 > th dose independent rect. 3 11
215 81.11 wind 9 43200 > th dose independent rect. 19 20
219 81.13 temperature 20 14400 < th dose independent rect. 19 3
220 81.13 wind 9 43200 < th dose independent rect. 19 20
257 81.30 wind 7 43200 > th dose dependent rect. 8 8
264 81.32 humidity 60 14400 < th dose independent rect. 17 1
278 81.36 wind 3 43200 > th dose dependent rect. 6 1
288 81.40 wind 9 43200 > th dose independent rect. 24 15
296 81.43 humidity 80 43200 > th dose independent rect. 3 1
307 81.46 wind 9 43200 > th dose independent rect. 2 13
308 81.47 wind 3 43200 > th dose dependent sin 2 NA
313 81.48 temperature 20 14400 > th dose dependent rect. 17 1
316 81.50 wind 3 43200 < th dose independent rect. 3 11
324 81.53 humidity 90 14400 > th dose independent rect. 21 2
328 81.54 wind 9 43200 < th dose independent rect. 8 7
336 81.57 humidity 80 43200 < th dose independent rect. 22 7
362 81.61 radiation 30 4320 < th dose independent rect. 16 17
369 81.64 humidity 80 43200 < th dose independent rect. 3 1
387 81.69 humidity 90 14400 > th dose independent sin 17 NA
395 81.71 humidity 90 14400 < th dose independent sin 18 NA
399 81.71 humidity 90 14400 < th dose independent rect. 7 18
402 81.72 humidity 90 14400 < th dose independent rect. 18 1
409 81.73 wind 9 43200 > th dose independent rect. 8 7
421 81.75 wind 9 43200 < th dose dependent sin 3 NA
450 81.80 humidity 90 14400 > th dose independent rect. 9 16
453 81.81 humidity 80 43200 < th dose independent rect. 23 1
463 81.82 wind 9 43200 < th dose dependent rect. 11 2
487 81.88 wind 1 43200 > th dose dependent rect. 9 5
490 81.89 humidity 90 14400 < th dose independent rect. 10 14
499 81.90 humidity 90 14400 > th dose independent rect. 10 14
530 81.97 wind 3 43200 > th dose independent rect. 9 4
533 81.97 temperature 25 1440 > th dose dependent rect. 10 11
544 81.99 wind 1 43200 > th dose dependent rect. 11 2
555 82.01 wind 9 43200 < th dose independent rect. 9 5
570 82.04 radiation 20 4320 < th dose independent rect. 7 1
574 82.04 wind 9 43200 < th dose dependent rect. 9 5
579 82.05 temperature 20 14400 > th dose independent rect. 18 4
580 82.05 humidity 80 14400 > th dose independent rect. 8 5
602 82.08 wind 7 43200 > th dose dependent sin 1 NA
606 82.09 humidity 80 43200 < th dose dependent rect. 22 9
608 82.10 humidity 90 14400 > th dose independent rect. 18 2
619 82.11 radiation 1 4320 > th dose independent rect. 18 1
650 82.14 wind 7 43200 > th dose dependent rect. 19 21
654 82.15 temperature 25 1440 > th dose dependent rect. 6 15
666 82.17 humidity 90 14400 > th dose independent rect. 7 20
683 82.20 wind 9 43200 > th dose independent rect. 9 5
689 82.20 temperature 25 1440 > th dose dependent sin 20 NA
721 82.24 radiation 1 4320 < th dose independent rect. 18 1
758 82.29 radiation 30 4320 < th dose independent rect. 18 15
765 82.30 radiation 30 4320 < th dose independent rect. 20 13
773 82.31 radiation 30 4320 < th dose independent rect. 22 11
784 82.33 radiation 30 4320 < th dose independent rect. 24 9
804 82.35 radiation 30 4320 < th dose independent rect. 6 3
813 82.36 radiation 30 4320 < th dose independent rect. 2 7
849 82.39 radiation 30 4320 < th dose independent rect. 4 5
862 82.40 radiation 20 4320 > th dose dependent rect. 16 16
873 82.42 wind 7 43200 > th dose independent sin 3 NA
939 82.49 radiation 1 4320 > th dose independent rect. 18 16
988 82.55 humidity 80 14400 > th dose independent rect. 8 12