Os11g0265900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0265900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Disease resistance protein family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.78 | 0.45 | 8.75 | 0.995 | 2.95 | -0.0129 | -2.02 | -3.73 | 0.828 | 15.6 | 93.29 | 302 | -- | -- |
| 102.77 | 0.476 | 8.74 | 0.915 | 2.97 | -0.106 | -1.23 | -- | 0.799 | 15.6 | 93.29 | 302 | -- | -- |
| 100.93 | 0.468 | 8.75 | 0.968 | 2.99 | 0.061 | -- | -2.74 | 0.841 | 15.7 | 93.86 | 375 | -- | -- |
| 106.29 | 0.48 | 8.76 | 0.933 | 2.98 | -0.255 | -- | -- | 0.745 | 15.6 | 93.33 | 1974 | -- | -- |
| 324.73 | 0.844 | 8.78 | 0.839 | -- | -2.12 | -- | 0.333 | 0.54 | -- | 70.89 | 166 | -- | -- |
| 102.94 | 0.476 | 8.74 | 0.906 | 3 | -- | -1.18 | -- | 0.811 | 15.6 | -- | -- | -- | -- |
| 107.17 | 0.485 | 8.74 | 0.887 | 2.99 | -- | -- | -- | 0.804 | 15.7 | -- | -- | -- | -- |
| 282.92 | 0.783 | 8.77 | 0.893 | -- | -2.43 | -- | -- | 0.604 | -- | 65.93 | 150 | -- | -- |
| 105.37 | 0.478 | 8.81 | -- | 2.99 | -0.793 | -- | -- | 0.551 | 15.7 | 95 | 47182 | -- | -- |
| 604.54 | 1.15 | 8.74 | 0.762 | -- | -- | -- | -- | 0.724 | -- | -- | -- | -- | -- |
| 127.9 | 0.529 | 8.77 | -- | 2.98 | -- | -- | -- | 0.705 | 15.7 | -- | -- | -- | -- |
| 303.25 | 0.811 | 8.79 | -- | -- | -2.44 | -- | -- | 0.508 | -- | 65.36 | 150 | -- | -- |
| 619.85 | 1.16 | 8.76 | -- | -- | -- | -- | -- | 0.64 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.37 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 2 | 81.32 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 4 | 81.55 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 5 |
| 12 | 82.08 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 15 | 82.14 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 18 | 82.80 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 23 | 82.99 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 3 |
| 27 | 83.05 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 18 |
| 29 | 83.26 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 30 | 83.27 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 5 |
| 31 | 83.27 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 22 | 6 |
| 33 | 83.43 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 42 | 83.70 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 51 | 83.84 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 52 | 83.88 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 17 |
| 62 | 84.18 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 19 |
| 63 | 84.25 | humidity | 60.0 | 270 | > th | dose independent | rect. | 15 | 5 |
| 82 | 84.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 83 | 84.70 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 10 |
| 84 | 84.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 87 | 84.71 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 22 | 3 |
| 89 | 84.75 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 23 | 4 |
| 90 | 84.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 10 |
| 91 | 84.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 10 |
| 109 | 85.03 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 10 |
| 120 | 85.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 126 | 85.29 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 3 |
| 127 | 85.29 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 129 | 85.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 130 | 85.34 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 131 | 85.34 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 134 | 85.34 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 135 | 85.34 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 142 | 85.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 21 |
| 143 | 85.34 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 148 | 85.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 162 | 85.56 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 163 | 85.59 | wind | 1.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 166 | 85.62 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 19 |
| 169 | 85.67 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 15 | 5 |
| 171 | 85.68 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 172 | 85.69 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 181 | 85.80 | wind | 9.0 | 30 | < th | dose dependent | rect. | 22 | 6 |
| 186 | 85.89 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 5 |
| 190 | 85.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 5 |
| 192 | 85.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 5 |
| 204 | 86.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 205 | 86.00 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 5 |
| 206 | 86.00 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 209 | 86.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 210 | 86.00 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 5 |
| 216 | 86.00 | wind | 9.0 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 218 | 86.00 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 5 |
| 226 | 86.03 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 5 |
| 246 | 86.21 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 259 | 86.27 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 3 |
| 273 | 86.28 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 19 |
| 322 | 86.34 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 5 |
| 333 | 86.42 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 14 |
| 334 | 86.42 | wind | 9.0 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 335 | 86.42 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 14 |
| 336 | 86.43 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 21 |
| 339 | 86.45 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 378 | 86.54 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 19 |
| 386 | 86.60 | radiation | 30.0 | 270 | < th | dose independent | rect. | 14 | 7 |
| 424 | 86.76 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 21 |
| 428 | 86.76 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 442 | 86.82 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 22 | 5 |
| 506 | 86.90 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 526 | 86.92 | wind | 1.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 538 | 86.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 1 |
| 542 | 86.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 19 |
| 543 | 86.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 545 | 86.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 19 |
| 547 | 86.99 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 548 | 86.99 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 549 | 86.99 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 550 | 86.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 553 | 86.99 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 554 | 86.99 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 560 | 86.99 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 561 | 86.99 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 590 | 87.11 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 593 | 87.12 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 19 |
| 614 | 87.22 | radiation | 1.0 | 90 | > th | dose independent | sin | 22 | NA |
| 626 | 87.27 | radiation | 1.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 635 | 87.29 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 21 |
| 641 | 87.31 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 18 |
| 642 | 87.31 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 18 |
| 645 | 87.33 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 699 | 87.49 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 764 | 87.62 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 4 |
| 773 | 87.66 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 19 |
| 840 | 87.78 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 19 |
| 910 | 87.89 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 18 |
| 918 | 87.93 | radiation | 1.0 | 270 | < th | dose independent | sin | 1 | NA |
| 925 | 87.93 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 18 |
| 933 | 87.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 6 |
| 937 | 87.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 18 |
| 959 | 88.05 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 16 |
| 981 | 88.07 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 6 |
| 983 | 88.07 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 18 |
| 985 | 88.07 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 18 |
| 990 | 88.10 | humidity | 70.0 | 10 | > th | dose independent | rect. | 16 | 6 |