Os11g0265800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 2OG-Fe(II) oxygenase domain containing protein.
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Os11g0265800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 2OG-Fe(II) oxygenase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 362.38 | 0.894 | 3.73 | -2.04 | 0.347 | 1.38 | 0.722 | -0.986 | -0.981 | 7.47 | 19 | 777 | -- | -- |
| 361.62 | 0.886 | 3.75 | -2.11 | 0.333 | 1.72 | 0.605 | -- | -1 | 7.2 | 18.7 | 692 | -- | -- |
| 363.74 | 0.888 | 3.73 | -2.05 | 0.347 | 1.4 | -- | -0.782 | -0.989 | 7.41 | 18.95 | 776 | -- | -- |
| 362.56 | 0.887 | 3.75 | -2.1 | 0.335 | 1.7 | -- | -- | -1.01 | 7.38 | 18.73 | 690 | -- | -- |
| 369.04 | 0.895 | 3.74 | -2.06 | -- | 1.67 | -- | -0.57 | -0.973 | -- | 18.77 | 653 | -- | -- |
| 405.41 | 0.944 | 3.8 | -2.65 | 0.477 | -- | 0.252 | -- | -1.24 | 8.39 | -- | -- | -- | -- |
| 405.61 | 0.943 | 3.8 | -2.65 | 0.476 | -- | -- | -- | -1.24 | 8.45 | -- | -- | -- | -- |
| 368.35 | 0.894 | 3.76 | -2.07 | -- | 1.79 | -- | -- | -0.991 | -- | 18.74 | 670 | -- | -- |
| 458.89 | 0.998 | 3.68 | -- | 0.286 | 2.83 | -- | -- | -0.678 | 6.42 | 18.6 | 748 | -- | -- |
| 418.27 | 0.956 | 3.81 | -2.64 | -- | -- | -- | -- | -1.23 | -- | -- | -- | -- | -- |
| 590.25 | 1.14 | 3.73 | -- | 0.468 | -- | -- | -- | -0.941 | 8.87 | -- | -- | -- | -- |
| 462.39 | 1 | 3.69 | -- | -- | 2.88 | -- | -- | -0.678 | -- | 18.62 | 690 | -- | -- |
| 602.74 | 1.15 | 3.75 | -- | -- | -- | -- | -- | -0.938 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 355.48 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 24 | 11 |
| 2 | 355.52 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 24 | 11 |
| 4 | 355.76 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 24 | 11 |
| 21 | 360.01 | temperature | 20 | 720 | < th | dose dependent | rect. | 13 | 17 |
| 44 | 361.55 | humidity | 80 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 51 | 362.07 | humidity | 60 | 43200 | < th | dose dependent | rect. | 16 | 17 |
| 59 | 362.41 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 6 |
| 78 | 362.83 | temperature | 20 | 720 | < th | dose dependent | sin | 13 | NA |
| 88 | 363.07 | humidity | 70 | 43200 | < th | dose dependent | rect. | 12 | 21 |
| 98 | 363.25 | atmosphere | 1010 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 104 | 363.26 | humidity | 80 | 43200 | < th | dose dependent | rect. | 6 | 9 |
| 106 | 363.28 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 110 | 363.34 | atmosphere | 1010 | 4320 | < th | dose independent | rect. | 12 | 2 |
| 150 | 363.65 | humidity | 60 | 43200 | < th | dose dependent | sin | 13 | NA |
| 181 | 363.83 | humidity | 80 | 43200 | < th | dose dependent | sin | 0 | NA |
| 202 | 363.91 | humidity | 70 | 43200 | < th | dose dependent | rect. | 12 | 13 |
| 218 | 363.97 | humidity | 70 | 43200 | < th | dose dependent | rect. | 16 | 23 |
| 232 | 364.03 | humidity | 70 | 43200 | < th | dose dependent | rect. | 4 | 21 |
| 235 | 364.03 | humidity | 70 | 43200 | < th | dose dependent | rect. | 19 | 22 |
| 258 | 364.08 | humidity | 70 | 43200 | < th | dose dependent | no | NA | NA |
| 262 | 364.08 | humidity | 90 | 43200 | < th | dose dependent | rect. | 8 | 14 |
| 363 | 364.24 | humidity | 60 | 43200 | < th | dose dependent | rect. | 16 | 8 |
| 519 | 364.44 | humidity | 50 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 522 | 364.44 | humidity | 60 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 615 | 364.61 | temperature | 20 | 720 | < th | dose dependent | no | NA | NA |
| 617 | 364.61 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 668 | 364.71 | humidity | 50 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 689 | 364.74 | temperature | 20 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 737 | 364.85 | temperature | 20 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 822 | 365.03 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 21 |
| 867 | 365.12 | humidity | 50 | 43200 | > th | dose independent | rect. | 15 | 18 |
| 868 | 365.12 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 18 |