Os11g0265400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glucose/ribitol dehydrogenase family protein.
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Os11g0265400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glucose/ribitol dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.94 | 0.22 | 11.9 | -0.904 | 0.323 | 0.568 | 0.42 | -1.67 | -0.18 | 20.6 | 15.91 | 459 | -- | -- |
| 23.79 | 0.227 | 11.8 | -0.614 | 0.322 | 0.535 | 0.152 | -- | -0.0946 | 20.5 | 14.93 | 468 | -- | -- |
| 22.32 | 0.22 | 11.9 | -0.865 | 0.345 | 0.592 | -- | -1.44 | -0.165 | 21 | 15.65 | 342 | -- | -- |
| 23.84 | 0.227 | 11.8 | -0.62 | 0.318 | 0.565 | -- | -- | -0.102 | 20.6 | 14.72 | 463 | -- | -- |
| 26.86 | 0.241 | 11.9 | -0.941 | -- | 0.812 | -- | -1.37 | -0.21 | -- | 16.2 | 547 | -- | -- |
| 27.36 | 0.245 | 11.8 | -0.495 | 0.456 | -- | 0.192 | -- | -0.0182 | 19.9 | -- | -- | -- | -- |
| 27.46 | 0.245 | 11.8 | -0.5 | 0.456 | -- | -- | -- | -0.0178 | 19.9 | -- | -- | -- | -- |
| 28.1 | 0.247 | 11.8 | -0.698 | -- | 0.824 | -- | -- | -0.146 | -- | 14.76 | 577 | -- | -- |
| 33.07 | 0.268 | 11.8 | -- | 0.393 | 0.276 | -- | -- | 0.0023 | 20.2 | 15.23 | 396 | -- | -- |
| 38.77 | 0.291 | 11.8 | -0.505 | -- | -- | -- | -- | -0.024 | -- | -- | -- | -- | -- |
| 34.04 | 0.273 | 11.8 | -- | 0.46 | -- | -- | -- | 0.0378 | 19.8 | -- | -- | -- | -- |
| 39.81 | 0.294 | 11.8 | -- | -- | 0.584 | -- | -- | -0.0379 | -- | 14.07 | 534 | -- | -- |
| 45.5 | 0.315 | 11.8 | -- | -- | -- | -- | -- | 0.032 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 3 | 20.78 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 9 |
| 5 | 20.80 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 25 | 20.90 | temperature | 15.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 26 | 20.91 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 53 | 21.00 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 57 | 21.05 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 11 | NA |
| 74 | 21.11 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 6 |
| 102 | 21.21 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 119 | 21.25 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 125 | 21.26 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 126 | 21.26 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 1 | 9 |
| 149 | 21.34 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 172 | 21.37 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 268 | 21.54 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 378 | 21.75 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 389 | 21.77 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 9 |
| 403 | 21.79 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 408 | 21.80 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 412 | 21.80 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 414 | 21.80 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 4 | 16 |
| 418 | 21.81 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 440 | 21.83 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 453 | 21.85 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 462 | 21.86 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 464 | 21.86 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 465 | 21.86 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 512 | 21.90 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 513 | 21.90 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 555 | 21.94 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 557 | 21.94 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 586 | 21.97 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 599 | 21.99 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 609 | 21.99 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 610 | 22.00 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 626 | 22.00 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 628 | 22.01 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 666 | 22.05 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 675 | 22.06 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 696 | 22.08 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 16 |
| 708 | 22.08 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 760 | 22.12 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 761 | 22.12 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 773 | 22.12 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 15 |
| 822 | 22.14 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 870 | 22.17 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 871 | 22.17 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 880 | 22.17 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 881 | 22.17 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 891 | 22.18 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 894 | 22.18 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 918 | 22.19 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 935 | 22.20 | wind | 5.0 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 956 | 22.21 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 957 | 22.21 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 968 | 22.21 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 13 |