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Os11g0264700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.58 (0.0156) R2 : 0.514
β1 : 0.795 (0.0571) R2dD : 0.214 R2D : 0.139
β2 : 0.554 (0.037) R2dC : 0.239 R2C : 0.215
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.334 (0.0333) R2dN8 : 0.144 R2N8 : 0.0544
σ : 0.293
deviance : 39.19
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_____
C
peak time of C : 23.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
29.05 0.253 9.56 0.938 0.665 0.543 0.339 -0.164 0.411 23.6 72.18 1242 -- --
29.11 0.251 9.56 0.925 0.669 0.534 0.362 -- 0.41 23.6 73 1242 -- --
29.51 0.253 9.56 0.937 0.66 0.542 -- -0.27 0.411 23.7 72.39 1242 -- --
29.67 0.254 9.56 0.905 0.659 0.533 -- -- 0.404 23.7 72.97 1244 -- --
45.5 0.316 9.56 0.842 -- 0.348 -- -0.0833 0.351 -- 75 1580 -- --
38.79 0.292 9.58 0.808 0.556 -- 0.308 -- 0.335 23.3 -- -- -- --
39.19 0.293 9.58 0.795 0.554 -- -- -- 0.334 23.4 -- -- -- --
45.54 0.316 9.56 0.839 -- 0.348 -- -- 0.35 -- 75 1580 -- --
48.33 0.324 9.58 -- 0.57 0.725 -- -- 0.303 23.7 84.8 1422 -- --
58.41 0.357 9.56 0.809 -- -- -- -- 0.34 -- -- -- -- --
55.83 0.35 9.6 -- 0.562 -- -- -- 0.245 23.5 -- -- -- --
64.07 0.374 9.58 -- -- 0.33 -- -- 0.256 -- 75 1580 -- --
75.68 0.406 9.58 -- -- -- -- -- 0.25 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.72 humidity 50 720 > th dose dependent rect. 17 2
2 28.82 humidity 60 14400 < th dose independent rect. 17 1
3 28.97 humidity 60 14400 > th dose independent rect. 17 2
4 28.99 humidity 60 14400 > th dose independent rect. 17 4
9 29.00 humidity 60 14400 > th dose independent rect. 17 11
16 29.01 humidity 60 14400 > th dose independent rect. 17 15
20 29.12 humidity 60 14400 < th dose independent rect. 17 15
22 29.14 humidity 60 14400 < th dose independent rect. 17 4
34 29.24 temperature 15 90 > th dose dependent rect. 4 14
35 29.25 humidity 60 14400 < th dose dependent rect. 16 17
39 29.37 humidity 50 720 > th dose dependent rect. 7 20
55 29.43 humidity 60 14400 < th dose dependent rect. 16 3
56 29.44 humidity 60 14400 < th dose dependent rect. 16 5
69 29.45 humidity 90 1440 < th dose dependent rect. 18 1
77 29.60 humidity 50 1440 > th dose dependent rect. 9 12
101 29.68 humidity 50 720 > th dose dependent rect. 15 12
102 29.69 humidity 80 1440 < th dose independent rect. 7 14
107 29.69 humidity 90 1440 < th dose dependent rect. 9 12
109 29.70 humidity 70 720 > th dose independent rect. 16 11
115 29.72 humidity 70 1440 > th dose independent sin 13 NA
152 29.82 humidity 70 1440 > th dose independent rect. 15 5
155 29.82 humidity 70 1440 > th dose independent rect. 15 9
168 29.84 humidity 80 1440 > th dose independent rect. 7 14
172 29.85 radiation 1 30 > th dose independent rect. 12 18
217 29.91 humidity 60 1440 > th dose dependent rect. 11 2
221 29.92 humidity 50 4320 > th dose independent rect. 15 1
224 29.92 humidity 50 1440 > th dose dependent sin 21 NA
231 29.93 humidity 50 14400 > th dose independent rect. 16 19
239 29.94 humidity 90 1440 < th dose dependent rect. 15 6
259 29.96 humidity 50 14400 < th dose independent rect. 16 19
270 29.98 humidity 90 1440 < th dose dependent sin 20 NA
280 29.99 humidity 70 720 > th dose independent rect. 16 3
294 30.01 humidity 70 1440 > th dose independent rect. 15 19
343 30.06 humidity 80 1440 < th dose dependent sin 16 NA
350 30.07 temperature 30 720 < th dose independent rect. 16 3
387 30.10 temperature 25 1440 > th dose dependent rect. 15 1
443 30.15 humidity 80 1440 < th dose independent sin 23 NA
451 30.15 temperature 20 10 > th dose dependent rect. 12 23
490 30.18 humidity 80 1440 < th dose dependent rect. 15 21
533 30.22 temperature 25 1440 > th dose dependent rect. 13 5
564 30.24 radiation 40 1440 < th dose dependent rect. 17 7
573 30.24 humidity 80 1440 < th dose dependent rect. 15 18
574 30.25 humidity 80 1440 > th dose independent sin 23 NA
577 30.25 wind 7 43200 > th dose dependent rect. 20 1
580 30.25 radiation 40 1440 < th dose dependent rect. 17 4
615 30.27 radiation 10 1440 < th dose dependent rect. 17 7
636 30.28 radiation 10 1440 < th dose dependent rect. 17 4
645 30.28 radiation 10 1440 < th dose dependent rect. 17 11
654 30.28 humidity 80 1440 < th dose dependent rect. 11 22
670 30.29 radiation 40 1440 < th dose dependent rect. 17 12
709 30.31 temperature 30 720 < th dose independent rect. 15 13
821 30.35 radiation 10 1440 < th dose dependent rect. 15 13
845 30.36 radiation 10 1440 < th dose dependent rect. 15 9
867 30.37 humidity 80 1440 < th dose independent rect. 7 8
878 30.37 radiation 10 1440 < th dose dependent rect. 15 5
954 30.40 radiation 10 1440 < th dose dependent rect. 15 3
990 30.41 humidity 80 1440 < th dose dependent no NA NA