Os11g0264600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0264600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.35 | 0.237 | 11.7 | 0.358 | 0.219 | 0.789 | -0.776 | 1.1 | -0.121 | 1.86 | 26.3 | 269 | -- | -- |
| 26.64 | 0.24 | 11.6 | 0.547 | 0.173 | 0.726 | -0.606 | -- | -0.0846 | 1.38 | 27.6 | 224 | -- | -- |
| 27.4 | 0.244 | 11.6 | 0.382 | 0.273 | 0.73 | -- | 0.995 | -0.127 | 1.86 | 26.13 | 366 | -- | -- |
| 27.86 | 0.246 | 11.6 | 0.568 | 0.201 | 0.718 | -- | -- | -0.0787 | 2.12 | 27.03 | 228 | -- | -- |
| 29.76 | 0.254 | 11.6 | 0.601 | -- | 0.968 | -- | -0.119 | -0.0937 | -- | 46.72 | 107 | -- | -- |
| 34.46 | 0.275 | 11.7 | 0.37 | 0.368 | -- | -0.496 | -- | -0.238 | 2.77 | -- | -- | -- | -- |
| 35.27 | 0.278 | 11.7 | 0.382 | 0.37 | -- | -- | -- | -0.235 | 3.04 | -- | -- | -- | -- |
| 29.13 | 0.251 | 11.6 | 0.616 | -- | 0.859 | -- | -- | -0.0517 | -- | 28.05 | 149 | -- | -- |
| 35.37 | 0.277 | 11.6 | -- | 0.271 | 0.486 | -- | -- | -0.181 | 2.78 | 26.27 | 167 | -- | -- |
| 43.1 | 0.307 | 11.7 | 0.398 | -- | -- | -- | -- | -0.225 | -- | -- | -- | -- | -- |
| 39.11 | 0.293 | 11.7 | -- | 0.377 | -- | -- | -- | -0.277 | 3.04 | -- | -- | -- | -- |
| 38.01 | 0.288 | 11.7 | -- | -- | 0.774 | -- | -- | -0.181 | -- | 51.63 | 123 | -- | -- |
| 47.27 | 0.321 | 11.7 | -- | -- | -- | -- | -- | -0.269 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.08 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 4 | 25.20 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 5 | 25.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 15 | 25.42 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 30 | 25.64 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 36 | 25.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 2 |
| 43 | 25.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 51 | 25.74 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 7 |
| 53 | 25.75 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 57 | 25.76 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 70 | 25.79 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 75 | 25.80 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 91 | 25.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 110 | 25.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 20 |
| 113 | 25.90 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 126 | 25.91 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 163 | 25.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 347 | 26.31 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 375 | 26.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 399 | 26.40 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 410 | 26.41 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 594 | 26.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 620 | 26.57 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 745 | 26.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 847 | 26.72 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 877 | 26.74 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 887 | 26.75 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 945 | 26.80 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 946 | 26.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 988 | 26.83 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 1 |