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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0261600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Subtilisin-like serine proteinase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.0201) R2 : 0.000192
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0125 (0.0423) R2dN8 : 0.000248 R2N8 : 0.000192
σ : 0.379
deviance : 65.8
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
51.53 0.334 2.56 2.43 0.299 -18.8 -0.138 117 0.0512 18.3 995 1442 -- --
61.7 0.369 2.96 0.119 0.264 -0.112 -0.266 -- 0.0313 18.4 995 1442 -- --
51.58 0.334 2.56 2.43 0.298 -18.8 -- 117 0.0507 18.2 995 1442 -- --
52.68 0.338 2.93 0.0486 0.259 1.26 -- -- 0.0826 18.9 997.5 1252 -- --
56.07 0.349 2.65 1.9 -- -14.8 -- 93.6 0.0441 -- 994.6 1725 -- --
61.71 0.368 2.96 0.118 0.263 -- -0.271 -- 0.0316 18.4 -- -- -- --
61.89 0.368 2.96 0.122 0.262 -- -- -- 0.0308 18.4 -- -- -- --
56.28 0.349 2.95 0.0609 -- 1.32 -- -- 0.0466 -- 997.3 1281 -- --
52.26 0.337 2.96 -- 0.287 1.38 -- -- 0.0438 18.3 997.3 1281 -- --
65.45 0.378 2.96 0.115 -- -- -- -- 0.0253 -- -- -- -- --
62.28 0.369 2.97 -- 0.26 -- -- -- 0.0173 18.4 -- -- -- --
56.38 0.35 2.96 -- -- 1.34 -- -- 0.0402 -- 997.3 1281 -- --
65.8 0.379 2.96 -- -- -- -- -- 0.0125 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 50.18 atmosphere 995 4320 > th dose independent rect. 16 5
4 50.25 atmosphere 1000 720 < th dose dependent rect. 22 3
5 50.39 atmosphere 1000 1440 < th dose dependent rect. 22 1
16 50.63 atmosphere 995 1440 > th dose independent rect. 15 8
22 50.90 atmosphere 995 1440 > th dose independent rect. 17 1
34 51.05 atmosphere 995 1440 > th dose independent rect. 15 22
36 51.06 atmosphere 1000 720 < th dose dependent rect. 19 11
37 51.07 atmosphere 995 1440 > th dose independent rect. 15 18
38 51.07 atmosphere 1000 720 < th dose dependent rect. 21 8
45 51.12 atmosphere 995 1440 > th dose independent rect. 2 19
47 51.15 atmosphere 995 1440 > th dose independent rect. 22 23
52 51.21 atmosphere 995 4320 < th dose independent rect. 16 1
65 51.25 atmosphere 995 1440 > th dose independent rect. 24 21
67 51.26 atmosphere 995 1440 > th dose independent rect. 24 23
74 51.30 atmosphere 995 4320 < th dose independent rect. 16 3
84 51.32 atmosphere 995 4320 < th dose dependent rect. 16 1
91 51.37 atmosphere 995 1440 < th dose independent rect. 18 1
114 51.37 atmosphere 995 1440 < th dose dependent rect. 18 1
118 51.37 atmosphere 995 4320 < th dose dependent rect. 16 3
145 51.39 atmosphere 995 1440 > th dose independent rect. 2 23
152 51.42 atmosphere 995 1440 < th dose independent sin 9 NA
200 51.44 atmosphere 995 1440 < th dose dependent sin 9 NA
270 51.50 atmosphere 995 1440 > th dose independent sin 17 NA
302 51.52 atmosphere 995 1440 > th dose independent rect. 10 23
329 51.53 atmosphere 995 1440 < th dose independent no NA NA
526 51.53 atmosphere 995 1440 < th dose dependent no NA NA
719 51.54 atmosphere 995 1440 > th dose independent no NA NA
775 51.56 atmosphere 995 1440 > th dose independent rect. 12 23
808 51.58 atmosphere 995 1440 > th dose independent rect. 6 23
812 51.59 atmosphere 995 1440 > th dose independent rect. 15 14
853 51.65 atmosphere 995 1440 > th dose independent sin 6 NA
966 51.74 atmosphere 995 1440 > th dose independent rect. 19 23
974 51.77 atmosphere 995 1440 > th dose independent rect. 6 15
996 51.85 atmosphere 995 1440 > th dose independent rect. 8 23