Os11g0259100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0259100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 243.66 | 0.733 | 3.18 | 0.226 | 0.191 | -0.421 | 0.631 | -2.79 | -0.122 | 19.9 | 1003 | 3826 | -- | -- |
| 252.14 | 0.74 | 3.19 | 0.222 | 0.136 | -0.514 | 0.564 | -- | -0.0854 | 20.1 | 1003 | 3147 | -- | -- |
| 244.81 | 0.729 | 3.18 | 0.21 | 0.192 | -0.428 | -- | -2.78 | -0.12 | 19.6 | 1003 | 3819 | -- | -- |
| 252.45 | 0.74 | 3.2 | 0.134 | 0.217 | -0.609 | -- | -- | -0.105 | 20.1 | 1003 | 3149 | -- | -- |
| 246.52 | 0.731 | 3.18 | 0.215 | -- | -0.404 | -- | -2.59 | -0.116 | -- | 1003 | 3211 | -- | -- |
| 261.84 | 0.759 | 3.22 | 0.203 | 0.198 | -- | 0.655 | -- | -0.184 | 20.1 | -- | -- | -- | -- |
| 263.11 | 0.76 | 3.22 | 0.186 | 0.2 | -- | -- | -- | -0.183 | 19.7 | -- | -- | -- | -- |
| 254.5 | 0.743 | 3.2 | 0.113 | -- | -0.651 | -- | -- | -0.0997 | -- | 1003 | 3149 | -- | -- |
| 252.71 | 0.74 | 3.2 | -- | 0.2 | -0.651 | -- | -- | -0.113 | 19.7 | 1003 | 3149 | -- | -- |
| 265.27 | 0.761 | 3.21 | 0.183 | -- | -- | -- | -- | -0.186 | -- | -- | -- | -- | -- |
| 264.02 | 0.76 | 3.22 | -- | 0.199 | -- | -- | -- | -0.203 | 19.8 | -- | -- | -- | -- |
| 254.84 | 0.744 | 3.2 | -- | -- | -0.663 | -- | -- | -0.109 | -- | 1003 | 3149 | -- | -- |
| 266.16 | 0.761 | 3.22 | -- | -- | -- | -- | -- | -0.206 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 239.40 | atmosphere | 1000 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 13 | 240.87 | wind | 1 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 19 | 241.28 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 39 | 242.09 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 40 | 242.11 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 44 | 242.16 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 103 | 242.93 | humidity | 80 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 139 | 243.27 | atmosphere | 1000 | 4320 | < th | dose dependent | sin | 7 | NA |
| 183 | 243.56 | atmosphere | 1015 | 30 | < th | dose dependent | rect. | 24 | 11 |
| 191 | 243.58 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 233 | 243.79 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 21 | 11 |
| 234 | 243.79 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 21 | 11 |
| 236 | 243.80 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 237 | 243.80 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 254 | 243.88 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 23 | 9 |
| 255 | 243.88 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 23 | 9 |
| 430 | 244.30 | humidity | 70 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 458 | 244.36 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 459 | 244.36 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 479 | 244.41 | humidity | 70 | 4320 | > th | dose independent | rect. | 10 | 4 |
| 544 | 244.55 | humidity | 70 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 581 | 244.61 | humidity | 70 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 607 | 244.66 | atmosphere | 1005 | 4320 | < th | dose dependent | no | NA | NA |
| 652 | 244.73 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 665 | 244.74 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 3 | 23 |
| 673 | 244.76 | humidity | 70 | 4320 | < th | dose independent | rect. | 10 | 5 |
| 703 | 244.82 | atmosphere | 1000 | 4320 | > th | dose independent | sin | 9 | NA |
| 712 | 244.83 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 14 | 18 |
| 735 | 244.87 | atmosphere | 1000 | 4320 | < th | dose independent | sin | 9 | NA |
| 779 | 244.94 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 14 | 18 |
| 803 | 244.98 | wind | 5 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 812 | 244.99 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 903 | 245.11 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 977 | 245.20 | humidity | 70 | 4320 | > th | dose dependent | rect. | 10 | 1 |