Os11g0258900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0258900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87 | 0.438 | 9.65 | 0.278 | 0.398 | -1.42 | -0.539 | -0.0521 | 0.164 | 21.2 | 21.38 | 10 | -- | -- |
| 87 | 0.434 | 9.65 | 0.286 | 0.399 | -1.42 | -0.529 | -- | 0.166 | 21.2 | 21.44 | 9 | -- | -- |
| 87.86 | 0.437 | 9.65 | 0.366 | 0.402 | -1.47 | -- | 0.342 | 0.184 | 20.9 | 21.67 | 9 | -- | -- |
| 87.97 | 0.437 | 9.65 | 0.309 | 0.403 | -1.44 | -- | -- | 0.17 | 21 | 21.55 | 9 | -- | -- |
| 96.75 | 0.461 | 9.63 | 0.378 | -- | -1.57 | -- | 0.333 | 0.197 | -- | 21.17 | 7 | -- | -- |
| 119.87 | 0.513 | 9.71 | 0.00123 | 0.718 | -- | -0.293 | -- | -0.0723 | 0.235 | -- | -- | -- | -- |
| 120.24 | 0.513 | 9.71 | 0.0125 | 0.719 | -- | -- | -- | -0.071 | 0.275 | -- | -- | -- | -- |
| 96.53 | 0.458 | 9.64 | 0.324 | -- | -1.53 | -- | -- | 0.178 | -- | 21 | 3 | -- | -- |
| 90.29 | 0.443 | 9.66 | -- | 0.412 | -1.34 | -- | -- | 0.119 | 21.4 | 21.78 | 9 | -- | -- |
| 152.78 | 0.578 | 9.69 | 0.0363 | -- | -- | -- | -- | -0.0599 | -- | -- | -- | -- | -- |
| 120.24 | 0.513 | 9.71 | -- | 0.72 | -- | -- | -- | -0.0724 | 0.276 | -- | -- | -- | -- |
| 99.26 | 0.464 | 9.65 | -- | -- | -1.46 | -- | -- | 0.138 | -- | 21.1 | 3 | -- | -- |
| 152.82 | 0.577 | 9.69 | -- | -- | -- | -- | -- | -0.0639 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.92 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 2 | 85.21 | temperature | 30 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 6 | 85.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 7 | 86.18 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 8 | 86.31 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 10 | 86.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 12 |
| 11 | 86.55 | temperature | 10 | 10 | > th | dose dependent | sin | 1 | NA |
| 15 | 86.76 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 7 |
| 17 | 86.82 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 19 | 86.83 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 22 | 86.84 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 24 | 86.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 40 | 87.21 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 43 | 87.32 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 47 | 87.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 57 | 87.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 58 | 87.53 | temperature | 30 | 10 | < th | dose dependent | sin | 0 | NA |
| 64 | 87.59 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 15 |
| 74 | 87.70 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 78 | 87.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 87 | 88.06 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 91 | 88.15 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 108 | 88.35 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 160 | 88.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 18 |
| 173 | 88.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 176 | 89.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 197 | 89.13 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 198 | 89.13 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 250 | 89.47 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 360 | 90.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 482 | 90.74 | temperature | 25 | 10 | > th | dose independent | rect. | 1 | 19 |
| 487 | 90.75 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 492 | 90.79 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 553 | 91.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 633 | 91.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 643 | 91.56 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 673 | 91.66 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 707 | 91.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 797 | 92.17 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 875 | 92.46 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 929 | 92.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 935 | 92.69 | temperature | 25 | 10 | > th | dose independent | rect. | 1 | 21 |
| 974 | 92.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 1000 | 92.93 | temperature | 25 | 10 | < th | dose independent | rect. | 24 | 20 |