Os11g0258500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
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Os11g0258500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disease resistance protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.06 | 0.226 | 2.87 | 0.0147 | 0.0231 | 0.0783 | 0.273 | 1.36 | 0.0583 | 14.7 | 0.05293 | 338 | -- | -- |
| 24.24 | 0.229 | 2.88 | -0.0171 | 0.034 | 0.294 | 0.251 | -- | 0.0636 | 14.5 | 0.2272 | 338 | -- | -- |
| 23.31 | 0.225 | 2.87 | 0.0176 | 0.0329 | 0.0882 | -- | 1.35 | 0.0615 | 17 | 0.003868 | 338 | -- | -- |
| 24.44 | 0.23 | 2.88 | -0.00562 | 0.0487 | 0.31 | -- | -- | 0.0684 | 16.7 | 0.2989 | 338 | -- | -- |
| 23.36 | 0.225 | 2.87 | 0.0265 | -- | 0.0669 | -- | 1.35 | 0.0581 | -- | 0.1095 | 338 | -- | -- |
| 25.05 | 0.235 | 2.89 | 0.0287 | 0.0299 | -- | 0.324 | -- | 0.043 | 10.5 | -- | -- | -- | -- |
| 25.48 | 0.236 | 2.88 | 0.0416 | 0.0287 | -- | -- | -- | 0.0438 | 10.1 | -- | -- | -- | -- |
| 24.54 | 0.231 | 2.88 | -0.00774 | -- | 0.275 | -- | -- | 0.0628 | -- | 0.2001 | 338 | -- | -- |
| 24.44 | 0.23 | 2.88 | -- | 0.0486 | 0.305 | -- | -- | 0.0671 | 16.8 | 0.3 | 338 | -- | -- |
| 25.53 | 0.236 | 2.89 | 0.0412 | -- | -- | -- | -- | 0.0438 | -- | -- | -- | -- | -- |
| 25.53 | 0.236 | 2.89 | -- | 0.0285 | -- | -- | -- | 0.0392 | 10 | -- | -- | -- | -- |
| 24.55 | 0.231 | 2.88 | -- | -- | 0.273 | -- | -- | 0.0633 | -- | 0.2229 | 338 | -- | -- |
| 25.58 | 0.236 | 2.89 | -- | -- | -- | -- | -- | 0.0392 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.67 | wind | 1.0 | 90 | < th | dose dependent | rect. | 8 | 2 |
| 2 | 19.16 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 2 |
| 4 | 20.23 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 8 | 20.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 11 | 20.24 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 15 | 20.24 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 21 | 20.24 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 22 | 20.24 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 42 | 20.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 45 | 20.26 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 46 | 20.28 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 47 | 20.29 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 49 | 20.30 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 50 | 20.30 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 51 | 20.30 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 54 | 20.31 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 55 | 20.32 | wind | 7.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 56 | 20.32 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 61 | 20.33 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 64 | 20.33 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 65 | 20.33 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 69 | 20.33 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 71 | 20.33 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 76 | 20.33 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 77 | 20.33 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 78 | 20.33 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 83 | 20.33 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 84 | 20.34 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 86 | 20.34 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 88 | 20.36 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 91 | 20.39 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 98 | 20.48 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 99 | 20.50 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 104 | 20.62 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 109 | 20.70 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 111 | 20.77 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 149 | 21.00 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 150 | 21.00 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 247 | 22.21 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 252 | 22.39 | radiation | 30.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 269 | 22.48 | radiation | 30.0 | 90 | > th | dose independent | sin | 11 | NA |
| 289 | 22.59 | radiation | 40.0 | 30 | > th | dose independent | rect. | 14 | 20 |
| 331 | 22.64 | wind | 1.0 | 270 | < th | dose independent | rect. | 6 | 4 |
| 377 | 22.78 | radiation | 30.0 | 90 | < th | dose independent | sin | 11 | NA |
| 379 | 22.80 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 421 | 22.94 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 21 | 23 |
| 422 | 22.94 | wind | 1.0 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 423 | 22.94 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 441 | 22.95 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 463 | 22.97 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 558 | 23.04 | wind | 1.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 572 | 23.08 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 581 | 23.11 | wind | 1.0 | 270 | < th | dose dependent | rect. | 6 | 4 |
| 612 | 23.17 | temperature | 25.0 | 30 | > th | dose independent | rect. | 9 | 1 |
| 613 | 23.18 | atmosphere | 1010.0 | 10 | > th | dose independent | sin | 5 | NA |
| 626 | 23.20 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 1 |
| 636 | 23.20 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 638 | 23.20 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 673 | 23.26 | radiation | 20.0 | 90 | > th | dose dependent | sin | 11 | NA |
| 706 | 23.34 | atmosphere | 1010.0 | 90 | < th | dose independent | sin | 5 | NA |
| 749 | 23.36 | temperature | 25.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 769 | 23.37 | temperature | 25.0 | 30 | > th | dose independent | rect. | 6 | 5 |
| 879 | 23.45 | wind | 1.0 | 720 | < th | dose dependent | rect. | 4 | 3 |
| 885 | 23.46 | wind | 1.0 | 720 | < th | dose dependent | rect. | 4 | 6 |