Os11g0258400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0258400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 144.53 | 0.565 | 3.58 | 0.19 | 0.66 | -0.148 | 1.65 | -2.68 | 0.338 | 0.75 | 69.98 | 5421 | -- | -- |
| 153.34 | 0.577 | 3.58 | 0.323 | 0.634 | -0.319 | 1.65 | -- | 0.419 | 0.612 | 74.99 | 5701 | -- | -- |
| 152.87 | 0.576 | 3.58 | 0.137 | 0.651 | -0.088 | -- | -2.83 | 0.327 | 0.872 | 69 | 6029 | -- | -- |
| 161.84 | 0.592 | 3.55 | 0.257 | 0.656 | -0.41 | -- | -- | 0.502 | 0.963 | 75 | 5687 | -- | -- |
| 172.82 | 0.616 | 3.59 | 0.285 | -- | -0.355 | -- | -0.96 | 0.331 | -- | 71 | 6031 | -- | -- |
| 155.68 | 0.585 | 3.59 | 0.324 | 0.635 | -- | 1.45 | -- | 0.351 | 0.79 | -- | -- | -- | -- |
| 164.54 | 0.601 | 3.59 | 0.27 | 0.632 | -- | -- | -- | 0.343 | 0.879 | -- | -- | -- | -- |
| 176.25 | 0.621 | 3.58 | 0.329 | -- | -0.352 | -- | -- | 0.36 | -- | 76 | 6038 | -- | -- |
| 163.46 | 0.595 | 3.56 | -- | 0.65 | -0.447 | -- | -- | 0.491 | 0.946 | 75.78 | 5698 | -- | -- |
| 189.48 | 0.643 | 3.58 | 0.293 | -- | -- | -- | -- | 0.355 | -- | -- | -- | -- | -- |
| 166.46 | 0.604 | 3.6 | -- | 0.637 | -- | -- | -- | 0.313 | 0.898 | -- | -- | -- | -- |
| 177.86 | 0.623 | 3.58 | -- | -- | -0.361 | -- | -- | 0.329 | -- | 74.06 | 6014 | -- | -- |
| 191.74 | 0.646 | 3.59 | -- | -- | -- | -- | -- | 0.322 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 138.14 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 6 | 139.26 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 7 | 139.54 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 14 | 140.10 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 2 |
| 17 | 140.40 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 18 | 140.40 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 19 | 140.42 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 26 | 140.75 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 27 | 140.75 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 31 | 140.80 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 32 | 140.80 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 33 | 140.81 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 34 | 140.81 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 44 | 141.13 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 48 | 141.16 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 4 |
| 49 | 141.17 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 50 | 141.17 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 4 |
| 63 | 141.36 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 173 | 142.47 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 177 | 142.50 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 7 | 7 |
| 183 | 142.53 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 213 | 142.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 215 | 142.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 268 | 142.95 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 9 |
| 274 | 142.98 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 339 | 143.26 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 345 | 143.27 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 373 | 143.37 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 423 | 143.52 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 463 | 143.64 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 475 | 143.66 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 483 | 143.70 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 488 | 143.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 489 | 143.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 492 | 143.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 499 | 143.73 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 501 | 143.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 504 | 143.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 508 | 143.75 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 22 | 14 |
| 510 | 143.76 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 512 | 143.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 513 | 143.76 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 522 | 143.79 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 528 | 143.81 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 531 | 143.82 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 543 | 143.83 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 3 | 9 |
| 552 | 143.84 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 7 |
| 574 | 143.90 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 575 | 143.90 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 582 | 143.90 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 596 | 143.93 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 13 |
| 635 | 144.00 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 4 | 8 |
| 676 | 144.07 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 689 | 144.10 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 690 | 144.10 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 693 | 144.10 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 702 | 144.11 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 723 | 144.14 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 737 | 144.16 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 756 | 144.19 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 787 | 144.23 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 800 | 144.24 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 14 |
| 823 | 144.27 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 827 | 144.28 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 840 | 144.30 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 7 |
| 850 | 144.31 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 860 | 144.32 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 7 |
| 861 | 144.32 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 864 | 144.32 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 7 |
| 868 | 144.32 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 922 | 144.38 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 5 | NA |
| 939 | 144.40 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 940 | 144.41 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 20 | 4 |
| 941 | 144.41 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 20 | 4 |