Os11g0256900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : SAM dependent carboxyl methyltransferase family protein.
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Os11g0256900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : SAM dependent carboxyl methyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1169.38 | 1.61 | 4.72 | 0.104 | 1.41 | 6.95 | -3.1 | 10.4 | 3.3 | 6.13 | 1.32 | 1457 | -- | -- |
| 1139.75 | 1.57 | 4.5 | 1.11 | 1.36 | 6.38 | -2.53 | -- | 3.9 | 7.06 | 2.118 | 1482 | -- | -- |
| 1180.94 | 1.6 | 4.69 | 0.00125 | 1.45 | 6.98 | -- | 10.6 | 3.42 | 6.22 | 1.56 | 1471 | -- | -- |
| 1168.66 | 1.59 | 4.51 | 1.19 | 1.42 | 6.31 | -- | -- | 3.87 | 7.1 | 2.113 | 1482 | -- | -- |
| 1278.45 | 1.67 | 4.71 | 0.417 | -- | 6.97 | -- | 8.93 | 3.46 | -- | 1.562 | 1471 | -- | -- |
| 1788.66 | 1.98 | 4.77 | 0.341 | 1.27 | -- | -3.51 | -- | 2.78 | 5.6 | -- | -- | -- | -- |
| 1818.38 | 2 | 4.76 | 0.322 | 1.25 | -- | -- | -- | 2.79 | 5.31 | -- | -- | -- | -- |
| 1271.07 | 1.66 | 4.53 | 1.21 | -- | 6.06 | -- | -- | 3.89 | -- | 2.11 | 1471 | -- | -- |
| 1204.57 | 1.62 | 4.54 | -- | 1.42 | 6.06 | -- | -- | 3.7 | 6.98 | 2.12 | 1482 | -- | -- |
| 1899.67 | 2.04 | 4.78 | 0.365 | -- | -- | -- | -- | 2.82 | -- | -- | -- | -- | -- |
| 1821.12 | 2 | 4.77 | -- | 1.25 | -- | -- | -- | 2.76 | 5.3 | -- | -- | -- | -- |
| 1308.22 | 1.68 | 4.58 | -- | -- | 5.77 | -- | -- | 3.7 | -- | 2.144 | 1474 | -- | -- |
| 1903.19 | 2.04 | 4.79 | -- | -- | -- | -- | -- | 2.78 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1103.86 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 12 | 1108.79 | temperature | 25 | 14400 | > th | dose dependent | rect. | 23 | 16 |
| 18 | 1109.57 | temperature | 15 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 23 | 1109.85 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 47 | 1111.57 | temperature | 25 | 14400 | > th | dose dependent | rect. | 5 | 10 |
| 98 | 1115.17 | temperature | 25 | 14400 | > th | dose dependent | sin | 5 | NA |
| 116 | 1116.65 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 184 | 1120.72 | temperature | 25 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 211 | 1122.28 | temperature | 25 | 14400 | > th | dose dependent | rect. | 10 | 17 |
| 224 | 1122.68 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 273 | 1123.46 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 388 | 1125.69 | temperature | 25 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 398 | 1126.04 | temperature | 25 | 14400 | > th | dose independent | sin | 6 | NA |
| 424 | 1127.15 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 425 | 1127.23 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 501 | 1130.24 | temperature | 25 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 525 | 1130.93 | temperature | 25 | 14400 | < th | dose independent | sin | 6 | NA |
| 567 | 1132.40 | temperature | 25 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 620 | 1133.63 | wind | 1 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 681 | 1135.48 | temperature | 15 | 14400 | > th | dose dependent | sin | 23 | NA |
| 725 | 1136.62 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 20 |
| 895 | 1139.95 | temperature | 25 | 14400 | > th | dose independent | rect. | 11 | 22 |
| 920 | 1140.25 | temperature | 25 | 14400 | > th | dose independent | rect. | 11 | 20 |