Os11g0256200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF842, eukaryotic family protein.
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Os11g0256200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF842, eukaryotic family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.38 | 0.432 | 9.24 | 0.973 | 1.87 | 1.01 | 1.14 | 1 | -0.18 | 18.7 | 9.03 | 85 | -- | -- |
| 86.13 | 0.432 | 9.24 | 0.997 | 1.87 | 0.92 | 1.01 | -- | -0.173 | 18.6 | 7.769 | 85 | -- | -- |
| 87.57 | 0.436 | 9.24 | 0.959 | 1.88 | 0.981 | -- | 0.821 | -0.176 | 18.6 | 8.158 | 85 | -- | -- |
| 88.79 | 0.439 | 9.23 | 0.984 | 1.88 | 0.93 | -- | -- | -0.17 | 18.6 | 6.746 | 84 | -- | -- |
| 142.96 | 0.557 | 9.23 | 0.852 | -- | 2.06 | -- | 0.55 | -0.359 | -- | -41.54 | 679 | -- | -- |
| 98.3 | 0.465 | 9.22 | 0.991 | 1.95 | -- | 1.08 | -- | -0.137 | 17.7 | -- | -- | -- | -- |
| 101.15 | 0.471 | 9.22 | 0.985 | 1.95 | -- | -- | -- | -0.132 | 17.7 | -- | -- | -- | -- |
| 143.37 | 0.558 | 9.23 | 0.828 | -- | 2.08 | -- | -- | -0.369 | -- | -29.75 | 679 | -- | -- |
| 114.16 | 0.498 | 9.26 | -- | 1.85 | 0.939 | -- | -- | -0.272 | 18.6 | 8.535 | 92 | -- | -- |
| 299.03 | 0.808 | 9.19 | 0.923 | -- | -- | -- | -- | -0.179 | -- | -- | -- | -- | -- |
| 126.72 | 0.527 | 9.24 | -- | 1.94 | -- | -- | -- | -0.242 | 17.7 | -- | -- | -- | -- |
| 161.42 | 0.592 | 9.25 | -- | -- | 2.11 | -- | -- | -0.464 | -- | -4.283 | 680 | -- | -- |
| 321.52 | 0.837 | 9.21 | -- | -- | -- | -- | -- | -0.281 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.93 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 2 | 78.30 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 6 | 78.64 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 7 |
| 8 | 78.83 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 9 | 78.83 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 12 |
| 13 | 78.96 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 5 |
| 35 | 79.55 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 52 | 79.72 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 54 | 79.77 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 61 | 79.90 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 7 |
| 62 | 79.91 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 68 | 80.00 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 75 | 80.12 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 79 | 80.16 | humidity | 80.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 83 | 80.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 84 | 80.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 89 | 80.29 | radiation | 10.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 103 | 80.39 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 107 | 80.44 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 108 | 80.45 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 112 | 80.47 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 114 | 80.47 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 115 | 80.47 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 117 | 80.47 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 118 | 80.47 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 120 | 80.47 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 124 | 80.51 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 125 | 80.52 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 12 |
| 136 | 80.61 | radiation | 20.0 | 30 | < th | dose independent | rect. | 4 | 20 |
| 154 | 80.72 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 155 | 80.73 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 156 | 80.73 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 162 | 80.76 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 164 | 80.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 2 |
| 165 | 80.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 183 | 80.83 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 186 | 80.86 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 188 | 80.86 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 189 | 80.86 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 192 | 80.86 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 198 | 80.86 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 22 |
| 203 | 80.91 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 204 | 80.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 207 | 80.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 210 | 80.94 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 249 | 81.01 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 262 | 81.09 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 20 |
| 332 | 81.33 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 20 |
| 358 | 81.46 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 368 | 81.52 | wind | 9.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 372 | 81.55 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 375 | 81.55 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 376 | 81.55 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 377 | 81.55 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 392 | 81.60 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 400 | 81.63 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 7 |
| 410 | 81.69 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 433 | 81.87 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 13 |
| 451 | 81.91 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 471 | 81.98 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 495 | 82.06 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 514 | 82.14 | radiation | 1.0 | 30 | > th | dose independent | rect. | 18 | 15 |
| 530 | 82.20 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 12 |
| 546 | 82.27 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 2 | 13 |
| 550 | 82.29 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 11 |
| 565 | 82.36 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 9 |
| 566 | 82.36 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 610 | 82.46 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 14 |
| 613 | 82.47 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 643 | 82.53 | radiation | 30.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 713 | 82.62 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 9 |
| 733 | 82.65 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 791 | 82.73 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 7 | 6 |
| 800 | 82.80 | radiation | 1.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 806 | 82.81 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 16 | 21 |
| 807 | 82.82 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 811 | 82.82 | radiation | 20.0 | 90 | < th | dose independent | rect. | 11 | 22 |
| 854 | 82.96 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 18 |
| 929 | 83.09 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 961 | 83.13 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 8 | 7 |