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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0255500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Allyl alcohol dehydrogenase; NADP-dependent oxidoreductase-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4290 (--) R2 : 0.334
β1 : -10200 (--) R2dD : 32400000 R2D : -1.29e+08
β2 : -- (--) R2dC : -- R2C : --
β3 : 1980000 (--) R2dE : 4.44e+10 R2E : -4.45e+10
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -4700000 (--) R2dD*E : 4.43e+10 R2D*E : -4.42e+10
γ1 : 0.187 (--) R2dN8 : 0.0414 R2N8 : -96500000
σ : 0.356
deviance : 58.48
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_____
C
peak time of C : --
E
wheather : wind
threshold : 0.983
memory length : 13
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 8
open length of G : 0.368

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
58.31 0.356 4290 -10200 0.0436 1980000 0.118 -4700000 0.187 2.2 0.9955 11 8 0.355
3883410076880.63 91800 4280 -10200 5570 1980000 9.3 -- 2.03 19.9 1.001 76 8.01 0.604
58.36 0.356 4290 -10200 0.047 1980000 -- -4700000 0.186 3.33 0.9931 12 8 0.351
3874805316830.59 91700 4280 -10200 18000 1980000 -- -- 2.03 19.7 1.001 76 8.01 0.608
58.48 0.356 4290 -10200 -- 1980000 -- -4700000 0.187 -- 0.983 13 8 0.368
84.31 0.43 2.76 0.172 0.0747 -- 0.34 -- 0.181 5.66 -- -- -- --
84.59 0.431 2.76 0.173 0.0767 -- -- -- 0.179 5.48 -- -- -- --
3892648847734.38 91900 4270 -10200 -- 1980000 -- -- 36.5 -- 1 97 8.02 0.329
3888764153048.97 91800 4280 -- 18100 1980000 -- -- 650 19.7 1.001 76 8 0.611
84.9 0.431 2.76 0.176 -- -- -- -- 0.181 -- -- -- -- --
85.39 0.432 2.76 -- 0.0796 -- -- -- 0.16 5.39 -- -- -- --
3905082173375.5 92000 4420 -- -- 1980000 -- -- 863 -- 0.9002 46 17.9 1.95
85.72 0.432 2.77 -- -- -- -- -- 0.161 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 58.40 wind 1 10 < th dose independent rect. 8 1
3 58.40 wind 1 10 < th dose dependent rect. 8 1
6 67.67 wind 1 90 < th dose independent rect. 6 1
7 68.31 wind 1 90 < th dose independent rect. 6 3
12 70.48 wind 1 90 < th dose independent rect. 6 5
16 71.59 atmosphere 1005 10 > th dose dependent rect. 7 1
22 72.52 humidity 90 90 > th dose dependent rect. 6 1
25 73.10 wind 1 270 < th dose dependent rect. 4 1
31 74.10 humidity 80 10 > th dose independent rect. 8 1
40 75.11 wind 1 90 < th dose dependent rect. 6 5
45 75.36 wind 1 270 < th dose dependent rect. 4 3
50 75.67 wind 1 270 < th dose independent rect. 4 1
111 77.50 wind 1 270 < th dose dependent rect. 4 19
112 77.52 radiation 20 10 < th dose independent rect. 7 1
116 77.62 atmosphere 1005 90 > th dose independent rect. 7 1
128 77.78 wind 1 720 < th dose dependent rect. 20 2
129 77.78 wind 1 720 < th dose dependent rect. 18 4
141 77.89 wind 1 720 < th dose independent rect. 21 1
148 77.92 radiation 20 90 < th dose independent rect. 7 1
156 77.95 wind 1 270 < th dose dependent rect. 4 8
193 78.29 humidity 60 30 > th dose dependent rect. 7 5
261 78.81 radiation 10 10 > th dose independent rect. 7 1
296 78.94 radiation 30 90 < th dose dependent rect. 7 1
321 78.99 wind 1 90 < th dose independent rect. 6 17
363 79.19 temperature 25 10 < th dose independent rect. 7 1
387 79.26 atmosphere 1000 10 > th dose dependent rect. 7 5
430 79.39 wind 1 43200 > th dose independent rect. 21 1
443 79.41 temperature 25 30 < th dose independent rect. 7 5
475 79.49 wind 1 1440 > th dose independent rect. 21 1
477 79.49 wind 3 1440 < th dose independent rect. 15 6
495 79.54 wind 1 1440 > th dose independent rect. 15 3
513 79.59 wind 3 1440 > th dose independent rect. 16 5
528 79.62 wind 1 43200 < th dose independent rect. 21 1
537 79.63 humidity 70 90 > th dose dependent rect. 6 20
551 79.66 humidity 60 720 > th dose dependent rect. 5 3
593 79.75 wind 3 1440 > th dose independent rect. 18 2
601 79.75 wind 1 90 < th dose dependent rect. 6 17
650 79.82 wind 1 43200 < th dose dependent rect. 20 2
653 79.82 humidity 90 90 > th dose dependent rect. 6 17
654 79.83 temperature 30 90 < th dose dependent rect. 7 1
670 79.86 radiation 10 10 > th dose independent sin 9 NA
724 79.95 humidity 90 270 > th dose dependent rect. 4 20
745 79.99 temperature 30 30 < th dose dependent rect. 7 5
756 80.00 wind 1 270 < th dose dependent rect. 18 14
767 80.02 radiation 20 30 < th dose independent rect. 7 19
793 80.05 radiation 10 270 < th dose independent rect. 19 14
816 80.07 wind 1 270 < th dose dependent sin 6 NA
822 80.07 wind 1 270 < th dose dependent rect. 10 22
829 80.08 wind 1 1440 > th dose dependent rect. 16 6
856 80.12 wind 7 90 < th dose independent rect. 8 23
857 80.12 wind 3 1440 < th dose dependent rect. 16 1
882 80.15 radiation 10 10 < th dose independent sin 8 NA
892 80.16 temperature 20 90 > th dose independent rect. 7 1
907 80.17 wind 1 270 < th dose independent rect. 4 19
922 80.18 atmosphere 995 10 > th dose dependent rect. 7 9