Os11g0255200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0255200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.29 | 0.343 | 3.12 | 0.489 | 0.0987 | 11.2 | -0.214 | 37.7 | 0.0342 | 5.49 | 994.8 | 4770 | -- | -- |
| 55.98 | 0.351 | 3.01 | 0.0567 | 0.108 | 0.513 | -0.192 | -- | 0.0241 | 5.43 | 997.7 | 3676 | -- | -- |
| 53.29 | 0.34 | 3.12 | 0.493 | 0.0977 | 11.3 | -- | 38.1 | 0.0306 | 6.26 | 994.8 | 4799 | -- | -- |
| 55.28 | 0.346 | 3.01 | 0.0555 | 0.0972 | 0.423 | -- | -- | 0.034 | 5.45 | 997.5 | 5799 | -- | -- |
| 53.51 | 0.341 | 3.2 | 0.681 | -- | 17.5 | -- | 59 | 0.03 | -- | 994.8 | 4804 | -- | -- |
| 57.27 | 0.355 | 3.01 | 0.0773 | 0.101 | -- | -0.22 | -- | 0.0156 | 5.3 | -- | -- | -- | -- |
| 57.36 | 0.355 | 3.01 | 0.0775 | 0.103 | -- | -- | -- | 0.0168 | 6.1 | -- | -- | -- | -- |
| 55.74 | 0.348 | 3.01 | 0.0762 | -- | 0.491 | -- | -- | 0.0377 | -- | 997.5 | 5810 | -- | -- |
| 55.36 | 0.347 | 3.01 | -- | 0.104 | 0.492 | -- | -- | 0.0299 | 5.54 | 997.6 | 5822 | -- | -- |
| 57.91 | 0.356 | 3.01 | 0.0804 | -- | -- | -- | -- | 0.0191 | -- | -- | -- | -- | -- |
| 57.52 | 0.355 | 3.01 | -- | 0.104 | -- | -- | -- | 0.00821 | 6.06 | -- | -- | -- | -- |
| 55.89 | 0.348 | 3.01 | -- | -- | 0.491 | -- | -- | 0.0319 | -- | 997.6 | 5810 | -- | -- |
| 58.08 | 0.356 | 3.02 | -- | -- | -- | -- | -- | 0.0102 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.32 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 2 | 13 |
| 3 | 52.45 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 22 | 18 |
| 16 | 52.65 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 21 | 18 |
| 28 | 52.76 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 46 | 52.78 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 57 | 52.81 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 73 | 52.85 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 99 | 52.85 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 137 | 52.91 | atmosphere | 995.0 | 4320 | < th | dose dependent | sin | 5 | NA |
| 167 | 53.09 | atmosphere | 995.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 212 | 53.31 | atmosphere | 995.0 | 4320 | < th | dose independent | sin | 6 | NA |
| 225 | 53.32 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 20 | 19 |
| 228 | 53.34 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 22 | 17 |
| 251 | 53.45 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 5 | 10 |
| 300 | 53.54 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 9 |
| 314 | 53.61 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 14 | 7 |
| 389 | 54.12 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 390 | 54.12 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 398 | 54.15 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 420 | 54.25 | atmosphere | 995.0 | 4320 | < th | dose dependent | no | NA | NA |
| 421 | 54.25 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 22 | 5 |
| 423 | 54.25 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 14 | 15 |
| 487 | 54.26 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 1 | 23 |
| 532 | 54.32 | wind | 3.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 541 | 54.34 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 545 | 54.35 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 610 | 54.51 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 615 | 54.56 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 620 | 54.59 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 621 | 54.59 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 8 |
| 622 | 54.60 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 633 | 54.63 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 636 | 54.63 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 652 | 54.64 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 658 | 54.65 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 660 | 54.65 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 661 | 54.65 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 666 | 54.65 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 668 | 54.65 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 673 | 54.65 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 675 | 54.65 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 677 | 54.65 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 680 | 54.65 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 685 | 54.65 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 686 | 54.66 | atmosphere | 995.0 | 10 | > th | dose independent | sin | 9 | NA |
| 689 | 54.66 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 725 | 54.76 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 746 | 54.81 | atmosphere | 995.0 | 10 | < th | dose independent | sin | 9 | NA |
| 751 | 54.81 | atmosphere | 995.0 | 10 | < th | dose dependent | sin | 9 | NA |
| 755 | 54.82 | humidity | 70.0 | 30 | < th | dose independent | rect. | 18 | 1 |
| 756 | 54.82 | atmosphere | 995.0 | 10 | < th | dose independent | rect. | 16 | 2 |
| 763 | 54.82 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 764 | 54.82 | atmosphere | 995.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 765 | 54.82 | atmosphere | 995.0 | 10 | < th | dose dependent | rect. | 16 | 2 |
| 767 | 54.82 | atmosphere | 995.0 | 90 | < th | dose dependent | rect. | 17 | 22 |
| 769 | 54.83 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 771 | 54.83 | temperature | 30.0 | 10 | > th | dose independent | rect. | 18 | 1 |
| 774 | 54.83 | temperature | 30.0 | 10 | > th | dose independent | rect. | 16 | 2 |
| 839 | 54.83 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 886 | 54.84 | atmosphere | 995.0 | 90 | < th | dose independent | rect. | 16 | 1 |