Os11g0252400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os11g0252400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.69 | 0.51 | 6.66 | -1.87 | 1.16 | 3.58 | 0.154 | -0.246 | 0.101 | 1.74 | 12.16 | 1210 | -- | -- |
| 117.74 | 0.505 | 6.66 | -1.82 | 1.16 | 3.58 | 0.134 | -- | 0.112 | 1.74 | 12.38 | 1210 | -- | -- |
| 117.78 | 0.505 | 6.66 | -1.86 | 1.16 | 3.58 | -- | -0.172 | 0.104 | 1.74 | 12.13 | 1210 | -- | -- |
| 117.8 | 0.506 | 6.65 | -1.82 | 1.16 | 3.58 | -- | -- | 0.114 | 1.74 | 12.35 | 1210 | -- | -- |
| 184.11 | 0.632 | 6.66 | -1.95 | -- | 4.09 | -- | -0.18 | 0.048 | -- | 15.26 | 1079 | -- | -- |
| 324.15 | 0.844 | 6.52 | -0.738 | 1.57 | -- | 0.301 | -- | 0.748 | 1.62 | -- | -- | -- | -- |
| 324.51 | 0.844 | 6.52 | -0.748 | 1.57 | -- | -- | -- | 0.746 | 1.62 | -- | -- | -- | -- |
| 184.14 | 0.632 | 6.66 | -1.91 | -- | 4.13 | -- | -- | 0.0592 | -- | 15.03 | 1079 | -- | -- |
| 194.02 | 0.649 | 6.58 | -- | 1.18 | 2.83 | -- | -- | 0.429 | 1.82 | 7.225 | 1157 | -- | -- |
| 475.36 | 1.02 | 6.5 | -0.684 | -- | -- | -- | -- | 0.781 | -- | -- | -- | -- | -- |
| 339.24 | 0.862 | 6.5 | -- | 1.56 | -- | -- | -- | 0.829 | 1.61 | -- | -- | -- | -- |
| 259.01 | 0.75 | 6.58 | -- | -- | 2.62 | -- | -- | 0.398 | -- | 21.2 | 1076 | -- | -- |
| 487.71 | 1.03 | 6.48 | -- | -- | -- | -- | -- | 0.857 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.57 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 19 |
| 30 | 120.06 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 22 |
| 49 | 120.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 84 | 120.62 | temperature | 10 | 1440 | > th | dose dependent | sin | 14 | NA |
| 110 | 120.80 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 121 | 120.92 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 125 | 120.96 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 281 | 122.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 20 |
| 357 | 122.74 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 17 |
| 441 | 123.33 | temperature | 10 | 1440 | > th | dose dependent | sin | 6 | NA |
| 618 | 124.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 803 | 125.23 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 846 | 125.41 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 871 | 125.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 879 | 125.57 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 937 | 125.85 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 22 |