Os11g0251400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0251400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ankyrin repeat containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.95 | 0.417 | 10.7 | -1.18 | 1.1 | 0.893 | -0.662 | -0.0172 | 0.113 | 23.8 | 20.63 | 963 | -- | -- |
| 78.95 | 0.414 | 10.7 | -1.17 | 1.11 | 0.896 | -0.665 | -- | 0.113 | 23.8 | 20.64 | 968 | -- | -- |
| 80.72 | 0.418 | 10.7 | -1.17 | 1.11 | 0.9 | -- | -0.106 | 0.101 | 23.7 | 20.64 | 968 | -- | -- |
| 80.84 | 0.419 | 10.7 | -1.16 | 1.11 | 0.9 | -- | -- | 0.113 | 23.7 | 20.6 | 968 | -- | -- |
| 154.08 | 0.578 | 10.6 | -1.27 | -- | 1.21 | -- | -0.122 | 0.0419 | -- | 20.7 | 915 | -- | -- |
| 101.03 | 0.471 | 10.6 | -0.823 | 1.23 | -- | -0.754 | -- | 0.322 | 23.8 | -- | -- | -- | -- |
| 103.46 | 0.476 | 10.6 | -0.792 | 1.23 | -- | -- | -- | 0.326 | 23.7 | -- | -- | -- | -- |
| 154.12 | 0.578 | 10.6 | -1.24 | -- | 1.22 | -- | -- | 0.0453 | -- | 20.72 | 915 | -- | -- |
| 110.51 | 0.49 | 10.6 | -- | 1.13 | 0.508 | -- | -- | 0.295 | 23.7 | 21.4 | 892 | -- | -- |
| 198.84 | 0.659 | 10.6 | -0.757 | -- | -- | -- | -- | 0.341 | -- | -- | -- | -- | -- |
| 119.99 | 0.512 | 10.6 | -- | 1.22 | -- | -- | -- | 0.414 | 23.6 | -- | -- | -- | -- |
| 186.77 | 0.637 | 10.6 | -- | -- | 0.746 | -- | -- | 0.2 | -- | 22.21 | 886 | -- | -- |
| 213.94 | 0.683 | 10.6 | -- | -- | -- | -- | -- | 0.425 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.95 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 5 |
| 2 | 76.62 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 4 | 76.69 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 10 |
| 5 | 76.73 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 7 | 76.81 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 12 |
| 9 | 76.86 | temperature | 20 | 720 | > th | dose independent | sin | 10 | NA |
| 18 | 77.02 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 16 |
| 24 | 77.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 34 | 77.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 46 | 77.32 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 53 | 77.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 95 | 77.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 132 | 78.16 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 139 | 78.21 | temperature | 20 | 720 | < th | dose independent | sin | 9 | NA |
| 161 | 78.32 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 10 |
| 181 | 78.45 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 13 |
| 193 | 78.53 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 20 |
| 220 | 78.67 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 5 |
| 249 | 78.77 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 7 |
| 263 | 78.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 6 |
| 279 | 78.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 302 | 79.04 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 362 | 79.26 | temperature | 10 | 720 | > th | dose dependent | sin | 8 | NA |
| 597 | 80.04 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 23 |
| 750 | 80.54 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 758 | 80.55 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 23 |
| 770 | 80.57 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 23 |
| 790 | 80.65 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 807 | 80.69 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 23 |
| 846 | 80.79 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 852 | 80.81 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 941 | 81.11 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 23 |
| 954 | 81.13 | temperature | 10 | 270 | > th | dose dependent | rect. | 22 | 22 |
| 979 | 81.19 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 987 | 81.20 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 989 | 81.21 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |