Os11g0251200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os11g0251200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 136.06 | 0.548 | 9.11 | -0.277 | 0.254 | 1.02 | 1.06 | -1.26 | -0.163 | 18.2 | 15.22 | 10 | -- | -- |
| 137.84 | 0.551 | 9.11 | -0.28 | 0.217 | 1.15 | 1.63 | -- | -0.172 | 14.8 | 15.22 | 10 | -- | -- |
| 138.62 | 0.553 | 9.11 | -0.279 | 0.275 | 0.917 | -- | -1.08 | -0.168 | 20.1 | 15.22 | 10 | -- | -- |
| 145.21 | 0.565 | 9.11 | -0.248 | 0.295 | 0.892 | -- | -- | -0.166 | 20.3 | 15.22 | 10 | -- | -- |
| 141.6 | 0.557 | 9.1 | -0.282 | -- | 1.03 | -- | -1.1 | -0.171 | -- | 15.22 | 10 | -- | -- |
| 154.9 | 0.583 | 9.13 | -0.316 | 1.15 | -- | -1.05 | -- | -0.187 | 23.2 | -- | -- | -- | -- |
| 159.51 | 0.591 | 9.13 | -0.272 | 1.15 | -- | -- | -- | -0.182 | 23 | -- | -- | -- | -- |
| 148.46 | 0.57 | 9.1 | -0.251 | -- | 1.02 | -- | -- | -0.169 | -- | 15.22 | 10 | -- | -- |
| 146.84 | 0.567 | 9.1 | -- | 0.29 | 0.902 | -- | -- | -0.138 | 20.1 | 15.22 | 10 | -- | -- |
| 242.51 | 0.728 | 9.1 | -0.246 | -- | -- | -- | -- | -0.174 | -- | -- | -- | -- | -- |
| 161.46 | 0.594 | 9.12 | -- | 1.15 | -- | -- | -- | -0.152 | 23 | -- | -- | -- | -- |
| 149.93 | 0.57 | 9.09 | -- | -- | 1.05 | -- | -- | -0.18 | -- | 13.23 | 2 | -- | -- |
| 244.1 | 0.729 | 9.1 | -- | -- | -- | -- | -- | -0.146 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.81 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 13 | 129.75 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 1 | 16 |
| 23 | 130.20 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 1 | 13 |
| 39 | 130.88 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 1 | 11 |
| 40 | 131.02 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 24 | 10 |
| 48 | 131.16 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 17 |
| 55 | 131.21 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 9 |
| 73 | 131.44 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 24 | 11 |
| 113 | 131.85 | humidity | 80.0 | 270 | > th | dose independent | rect. | 24 | 14 |
| 150 | 132.19 | humidity | 80.0 | 10 | > th | dose independent | rect. | 1 | 15 |
| 202 | 132.59 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 213 | 132.65 | radiation | 20.0 | 30 | < th | dose dependent | sin | 4 | NA |
| 220 | 132.71 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 21 |
| 283 | 133.08 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 294 | 133.16 | humidity | 70.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 300 | 133.19 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 7 |
| 331 | 133.36 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 337 | 133.39 | humidity | 80.0 | 10 | > th | dose independent | rect. | 1 | 8 |
| 341 | 133.40 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 19 |
| 342 | 133.41 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 9 |
| 343 | 133.42 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 11 |
| 401 | 133.64 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 486 | 134.04 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 506 | 134.11 | radiation | 20.0 | 90 | < th | dose independent | rect. | 24 | 9 |
| 547 | 134.27 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 20 |
| 622 | 134.58 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 634 | 134.62 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 644 | 134.64 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 677 | 134.76 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 702 | 134.86 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 735 | 134.98 | radiation | 1.0 | 90 | > th | dose independent | sin | 3 | NA |
| 737 | 134.98 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 15 |
| 780 | 135.16 | humidity | 80.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 804 | 135.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 15 |
| 809 | 135.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 15 |
| 826 | 135.31 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 1 | 7 |
| 840 | 135.36 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 10 | 9 |
| 841 | 135.36 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 17 |
| 842 | 135.36 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 5 |
| 845 | 135.36 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 17 |
| 847 | 135.37 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 848 | 135.37 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 856 | 135.37 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 17 |
| 857 | 135.38 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 861 | 135.39 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 9 |
| 873 | 135.42 | radiation | 30.0 | 10 | < th | dose independent | rect. | 1 | 7 |
| 879 | 135.45 | temperature | 15.0 | 270 | > th | dose independent | rect. | 13 | 15 |
| 881 | 135.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 15 |
| 901 | 135.50 | temperature | 25.0 | 30 | < th | dose independent | rect. | 1 | 7 |
| 930 | 135.60 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 9 |
| 932 | 135.60 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 9 |
| 936 | 135.61 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 937 | 135.61 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 947 | 135.61 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 19 |
| 948 | 135.61 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 19 |
| 949 | 135.61 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 954 | 135.61 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 19 |
| 955 | 135.62 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 966 | 135.65 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 967 | 135.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 7 |
| 970 | 135.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 986 | 135.72 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 9 |