Os11g0247000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0247000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 287.73 | 0.797 | 9.19 | -1.59 | 1.76 | -1.56 | 0.249 | -0.228 | -0.263 | 1.04 | 69 | 1203 | -- | -- |
| 286.7 | 0.789 | 9.2 | -1.55 | 1.79 | -1.59 | 0.276 | -- | -0.343 | 0.918 | 68.12 | 1175 | -- | -- |
| 286.76 | 0.789 | 9.21 | -1.57 | 1.79 | -1.59 | -- | 0.0729 | -0.366 | 0.992 | 68.89 | 1175 | -- | -- |
| 286.77 | 0.789 | 9.21 | -1.58 | 1.78 | -1.58 | -- | -- | -0.371 | 1.01 | 68.12 | 1183 | -- | -- |
| 377.52 | 0.905 | 9.2 | -1.82 | -- | -1.04 | -- | -0.271 | -0.409 | -- | 78.99 | 55 | -- | -- |
| 375.59 | 0.909 | 9.21 | -1.91 | 1.36 | -- | -0.144 | -- | -0.373 | 1.2 | -- | -- | -- | -- |
| 375.67 | 0.908 | 9.21 | -1.9 | 1.36 | -- | -- | -- | -0.372 | 1.18 | -- | -- | -- | -- |
| 377.92 | 0.905 | 9.2 | -1.81 | -- | -1.04 | -- | -- | -0.389 | -- | 78.93 | 55 | -- | -- |
| 350.77 | 0.872 | 9.2 | -- | 1.85 | -1.74 | -- | -- | -0.226 | 0.863 | 69 | 1175 | -- | -- |
| 490.47 | 1.03 | 9.19 | -1.85 | -- | -- | -- | -- | -0.345 | -- | -- | -- | -- | -- |
| 471.12 | 1.02 | 9.16 | -- | 1.33 | -- | -- | -- | -0.16 | 1.12 | -- | -- | -- | -- |
| 464.15 | 1 | 9.15 | -- | -- | -1.05 | -- | -- | -0.19 | -- | 78.37 | 50 | -- | -- |
| 580.81 | 1.12 | 9.14 | -- | -- | -- | -- | -- | -0.139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 286.48 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 6 | 288.43 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 3 |
| 11 | 289.00 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 6 |
| 13 | 289.45 | wind | 1.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 31 | 291.18 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 7 |
| 35 | 291.66 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 42 | 292.17 | wind | 1.0 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 43 | 292.35 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 45 | 292.61 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 54 | 293.92 | wind | 1.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 66 | 294.33 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 80 | 295.08 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 83 | 295.26 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 89 | 295.83 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 101 | 296.33 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 102 | 296.44 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 14 | 19 |
| 103 | 296.45 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 113 | 296.69 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 118 | 296.76 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 122 | 296.94 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 125 | 296.99 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 180 | 297.43 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 181 | 297.46 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 19 |
| 193 | 297.76 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 1 | 12 |
| 194 | 297.77 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 196 | 297.80 | humidity | 80.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 202 | 297.91 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 203 | 297.92 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 22 |
| 224 | 298.16 | humidity | 70.0 | 1440 | < th | dose independent | sin | 21 | NA |
| 274 | 298.61 | humidity | 70.0 | 1440 | < th | dose independent | no | NA | NA |
| 332 | 298.71 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 375 | 299.07 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 8 |
| 412 | 299.33 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 414 | 299.35 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 15 |
| 417 | 299.38 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 418 | 299.38 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 438 | 299.53 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 444 | 299.59 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 470 | 299.87 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 472 | 299.89 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 485 | 300.05 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 487 | 300.06 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 507 | 300.17 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 528 | 300.26 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 581 | 300.50 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 22 |
| 583 | 300.51 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 13 |
| 604 | 300.54 | humidity | 70.0 | 1440 | > th | dose independent | no | NA | NA |
| 611 | 300.54 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 639 | 300.56 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 21 | 23 |
| 644 | 300.56 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 6 | 12 |
| 657 | 300.58 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 681 | 300.61 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 6 | 18 |
| 693 | 300.68 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 6 | 21 |
| 700 | 300.70 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 727 | 300.77 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 733 | 300.82 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 739 | 300.90 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 12 | 21 |
| 750 | 300.94 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 6 | 7 |
| 779 | 301.00 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 14 | 18 |
| 787 | 301.03 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 788 | 301.04 | humidity | 70.0 | 1440 | > th | dose independent | sin | 20 | NA |
| 805 | 301.10 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 2 | 16 |
| 806 | 301.10 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 20 | 22 |
| 812 | 301.12 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 6 | 10 |
| 819 | 301.15 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 829 | 301.19 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 14 | 2 |
| 861 | 301.23 | radiation | 20.0 | 1440 | < th | dose dependent | no | NA | NA |
| 870 | 301.25 | radiation | 10.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 940 | 301.44 | radiation | 20.0 | 1440 | < th | dose dependent | sin | 2 | NA |