Os11g0246900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os11g0246900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.12 | 0.24 | 12.7 | 0.243 | 0.558 | 0.444 | -0.0055 | -0.669 | 0.081 | 3.84 | 26.07 | 956 | -- | -- |
| 26.2 | 0.238 | 12.7 | 0.374 | 0.548 | 0.361 | -0.0251 | -- | 0.121 | 3.69 | 26.8 | 990 | -- | -- |
| 26.11 | 0.238 | 12.7 | 0.251 | 0.555 | 0.436 | -- | -0.64 | 0.0842 | 3.82 | 26.17 | 970 | -- | -- |
| 26.2 | 0.238 | 12.7 | 0.372 | 0.546 | 0.361 | -- | -- | 0.118 | 3.71 | 26.53 | 989 | -- | -- |
| 41.36 | 0.3 | 12.7 | 0.318 | -- | 0.391 | -- | -0.137 | 0.0804 | -- | 25.82 | 1143 | -- | -- |
| 30.02 | 0.257 | 12.7 | 0.463 | 0.566 | -- | 0.0485 | -- | 0.122 | 3.13 | -- | -- | -- | -- |
| 30.03 | 0.257 | 12.7 | 0.462 | 0.566 | -- | -- | -- | 0.121 | 3.14 | -- | -- | -- | -- |
| 41.12 | 0.299 | 12.7 | 0.346 | -- | 0.438 | -- | -- | 0.102 | -- | 24.9 | 1144 | -- | -- |
| 29.56 | 0.253 | 12.7 | -- | 0.55 | 0.454 | -- | -- | 0.0604 | 3.9 | 25.8 | 979 | -- | -- |
| 48.26 | 0.325 | 12.7 | 0.486 | -- | -- | -- | -- | 0.136 | -- | -- | -- | -- | -- |
| 35.65 | 0.279 | 12.7 | -- | 0.575 | -- | -- | -- | 0.07 | 3.14 | -- | -- | -- | -- |
| 44.07 | 0.309 | 12.7 | -- | -- | 0.536 | -- | -- | 0.0334 | -- | 24.6 | 1132 | -- | -- |
| 54.49 | 0.345 | 12.7 | -- | -- | -- | -- | -- | 0.0823 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.39 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 11 |
| 2 | 24.40 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 14 |
| 21 | 24.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 1 |
| 24 | 25.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 10 |
| 28 | 25.09 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 5 |
| 32 | 25.18 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 10 |
| 63 | 25.40 | temperature | 25 | 90 | < th | dose independent | rect. | 15 | 12 |
| 64 | 25.41 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 68 | 25.42 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 82 | 25.46 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 10 |
| 86 | 25.47 | humidity | 70 | 720 | < th | dose independent | rect. | 19 | 13 |
| 87 | 25.47 | temperature | 25 | 720 | > th | dose dependent | sin | 15 | NA |
| 125 | 25.55 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 144 | 25.61 | radiation | 20 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 156 | 25.63 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 2 |
| 229 | 25.76 | temperature | 25 | 720 | > th | dose independent | rect. | 18 | 2 |
| 234 | 25.77 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 247 | 25.79 | humidity | 70 | 720 | < th | dose independent | rect. | 19 | 1 |
| 324 | 25.90 | humidity | 70 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 349 | 25.91 | radiation | 10 | 10 | < th | dose dependent | rect. | 6 | 22 |
| 351 | 25.92 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 10 |
| 369 | 25.95 | radiation | 30 | 720 | < th | dose dependent | rect. | 16 | 9 |
| 391 | 25.99 | radiation | 10 | 720 | < th | dose independent | rect. | 16 | 1 |
| 437 | 26.05 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 15 |
| 449 | 26.07 | radiation | 10 | 720 | < th | dose independent | rect. | 16 | 10 |
| 474 | 26.10 | temperature | 25 | 720 | > th | dose independent | rect. | 12 | 10 |
| 476 | 26.10 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 17 |
| 516 | 26.14 | temperature | 30 | 90 | < th | dose dependent | sin | 14 | NA |
| 563 | 26.19 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 631 | 26.26 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 17 |
| 632 | 26.26 | temperature | 10 | 10 | > th | dose dependent | sin | 13 | NA |
| 672 | 26.30 | radiation | 1 | 720 | > th | dose independent | rect. | 10 | 9 |
| 717 | 26.33 | radiation | 10 | 30 | < th | dose independent | rect. | 6 | 22 |
| 744 | 26.35 | humidity | 50 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 753 | 26.36 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 780 | 26.39 | humidity | 70 | 720 | < th | dose independent | sin | 11 | NA |
| 790 | 26.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 842 | 26.45 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 4 |
| 857 | 26.46 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 13 |
| 886 | 26.49 | temperature | 10 | 720 | > th | dose dependent | sin | 19 | NA |
| 968 | 26.55 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 2 |