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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0246400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.87 (0.0248) R2 : 0.0137
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.131 (0.0523) R2dN8 : 0.0176 R2N8 : 0.0137
σ : 0.468
deviance : 100.35
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
98.01 0.465 2.85 0.0286 0.108 -0.196 0.0918 2.48 0.132 7.37 0.8912 35 -- --
99.64 0.468 2.86 -0.0187 0.093 0.137 0.0848 -- 0.132 7.32 0.8912 35 -- --
98.04 0.461 2.85 0.0308 0.108 -0.193 -- 2.46 0.132 7.38 0.9 34 -- --
99.65 0.468 2.86 -0.0168 0.0928 0.141 -- -- 0.132 7.62 0.8852 35 -- --
98.6 0.462 2.86 0.0322 -- -0.16 -- 2.59 0.135 -- 0.9 44 -- --
99.81 0.468 2.87 -0.0106 0.0985 -- 0.111 -- 0.129 6.8 -- -- -- --
99.83 0.468 2.87 -0.00836 0.0989 -- -- -- 0.129 7.17 -- -- -- --
100.08 0.466 2.87 -0.0192 -- 0.163 -- -- 0.137 -- 1 35 -- --
99.66 0.467 2.86 -- 0.0928 0.138 -- -- 0.134 7.62 0.8852 35 -- --
100.35 0.468 2.87 -0.00652 -- -- -- -- 0.131 -- -- -- -- --
99.83 0.467 2.86 -- 0.0988 -- -- -- 0.13 7.18 -- -- -- --
100.09 0.466 2.87 -- -- 0.158 -- -- 0.138 -- 1 35 -- --
100.35 0.468 2.87 -- -- -- -- -- 0.131 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 90.45 wind 7.0 10 > th dose dependent rect. 12 1
3 92.65 wind 7.0 10 > th dose independent rect. 12 1
5 93.71 humidity 90.0 10 < th dose dependent rect. 24 7
6 93.92 humidity 90.0 30 < th dose dependent rect. 5 2
12 94.35 temperature 25.0 10 > th dose dependent rect. 6 1
13 94.36 radiation 10.0 30 < th dose independent rect. 6 1
16 94.38 atmosphere 1010.0 30 < th dose independent rect. 6 1
18 94.44 wind 1.0 10 > th dose dependent rect. 6 1
19 94.48 temperature 25.0 10 > th dose dependent rect. 23 8
24 94.57 radiation 10.0 30 < th dose dependent rect. 6 1
32 94.81 humidity 90.0 30 < th dose independent rect. 5 2
39 95.00 radiation 1.0 10 > th dose dependent rect. 18 13
40 95.03 atmosphere 1015.0 30 < th dose dependent rect. 6 1
46 95.13 temperature 25.0 90 > th dose independent rect. 5 2
47 95.13 radiation 1.0 10 > th dose dependent rect. 6 1
48 95.14 wind 1.0 30 < th dose independent rect. 6 1
60 95.16 wind 7.0 30 < th dose independent rect. 7 23
64 95.21 temperature 25.0 270 > th dose dependent rect. 5 1
65 95.22 wind 3.0 30 > th dose independent rect. 6 1
70 95.28 humidity 90.0 30 < th dose independent rect. 24 7
72 95.29 wind 7.0 270 > th dose dependent rect. 9 1
80 95.35 wind 7.0 270 > th dose dependent rect. 7 3
117 95.52 atmosphere 1005.0 10 > th dose independent rect. 6 1
118 95.53 precipitation 0.1 30 < th dose independent rect. 7 23
119 95.53 precipitation 0.1 30 < th dose dependent rect. 7 23
132 95.61 temperature 10.0 10 > th dose independent rect. 6 1
134 95.61 temperature 30.0 10 < th dose independent rect. 6 1
135 95.61 humidity 50.0 10 > th dose independent rect. 6 1
143 95.61 precipitation 0.1 10 < th dose independent rect. 6 1
145 95.61 temperature 10.0 10 > th dose independent rect. 7 23
146 95.61 precipitation 0.1 10 < th dose dependent rect. 6 1
149 95.63 atmosphere 995.0 10 > th dose independent rect. 7 23
156 95.66 wind 9.0 4320 < th dose independent rect. 7 1
176 95.68 temperature 10.0 1440 > th dose independent rect. 7 1
180 95.68 temperature 30.0 1440 < th dose independent rect. 7 1
184 95.68 humidity 50.0 1440 > th dose independent rect. 7 1
189 95.68 atmosphere 995.0 1440 > th dose independent rect. 7 1
190 95.68 atmosphere 1015.0 1440 < th dose independent rect. 7 1
191 95.68 temperature 10.0 1440 > th dose independent rect. 8 23
199 95.73 radiation 1.0 30 > th dose independent rect. 6 1
208 95.79 radiation 1.0 90 > th dose independent rect. 4 3
220 95.81 humidity 50.0 10 > th dose dependent rect. 6 1
227 95.86 atmosphere 1005.0 30 > th dose dependent rect. 5 2
229 95.87 wind 9.0 10 < th dose dependent rect. 6 1
232 95.90 wind 9.0 270 > th dose independent rect. 9 1
243 95.91 atmosphere 995.0 10 > th dose dependent rect. 6 1
270 96.07 humidity 50.0 10 > th dose independent rect. 7 23
289 96.22 wind 9.0 30 < th dose dependent rect. 7 23
312 96.30 temperature 25.0 30 > th dose independent rect. 23 8
320 96.31 temperature 30.0 10 < th dose dependent rect. 6 1
324 96.34 temperature 25.0 10 > th dose independent rect. 23 2
332 96.40 radiation 40.0 1440 < th dose independent rect. 7 1
353 96.58 atmosphere 1015.0 30 < th dose independent rect. 7 23
385 96.79 temperature 10.0 720 > th dose independent rect. 11 8
386 96.79 atmosphere 1015.0 720 < th dose independent rect. 11 8
387 96.79 temperature 10.0 720 > th dose independent rect. 19 16
388 96.79 atmosphere 995.0 720 > th dose independent rect. 19 16
391 96.81 precipitation 0.1 720 < th dose independent rect. 2 17
394 96.81 precipitation 0.1 720 < th dose dependent rect. 2 17
397 96.82 temperature 10.0 720 > th dose independent rect. 23 8
398 96.82 temperature 30.0 720 < th dose independent rect. 23 8
399 96.82 humidity 50.0 720 > th dose independent rect. 23 8
401 96.82 atmosphere 995.0 720 > th dose independent rect. 23 8
402 96.82 radiation 30.0 720 < th dose independent rect. 23 8
404 96.82 temperature 10.0 720 > th dose independent rect. 7 16
414 96.86 atmosphere 1005.0 10 > th dose independent rect. 24 1
428 96.89 atmosphere 995.0 720 > th dose independent rect. 11 8
435 96.90 temperature 25.0 1440 < th dose independent rect. 5 1
436 96.90 wind 9.0 720 < th dose independent rect. 23 8
458 96.92 atmosphere 995.0 720 > th dose independent rect. 7 16
497 97.03 wind 5.0 10 < th dose dependent rect. 24 1
502 97.05 wind 7.0 720 < th dose independent rect. 1 9
506 97.06 humidity 90.0 30 < th dose independent rect. 15 16
518 97.10 temperature 30.0 720 < th dose independent rect. 19 16
523 97.12 temperature 10.0 30 > th dose dependent rect. 7 23
539 97.17 precipitation 0.1 720 < th dose independent rect. 7 16
541 97.17 precipitation 0.1 720 < th dose dependent rect. 7 16
565 97.21 wind 9.0 720 < th dose independent rect. 19 16
571 97.23 atmosphere 1010.0 10 < th dose independent rect. 24 1
573 97.24 atmosphere 995.0 10 > th dose dependent rect. 24 1
578 97.26 humidity 80.0 10 > th dose independent rect. 24 1
584 97.28 wind 5.0 10 < th dose independent rect. 24 1
592 97.30 humidity 50.0 720 > th dose independent rect. 19 16
598 97.32 atmosphere 1005.0 90 > th dose dependent rect. 24 7
602 97.33 temperature 10.0 10 > th dose independent rect. 24 1
603 97.33 temperature 30.0 10 < th dose independent rect. 24 1
604 97.33 humidity 50.0 10 > th dose independent rect. 24 1
608 97.33 radiation 1.0 10 < th dose independent rect. 24 1
613 97.33 precipitation 0.1 10 < th dose independent rect. 24 1
616 97.33 temperature 10.0 10 > th dose independent rect. 1 23
617 97.33 radiation 1.0 10 < th dose dependent rect. 24 1
622 97.33 precipitation 0.1 10 < th dose dependent rect. 24 1
626 97.34 humidity 50.0 10 > th dose dependent rect. 24 1
628 97.34 wind 5.0 10 > th dose dependent rect. 1 10
632 97.35 temperature 30.0 30 < th dose independent rect. 7 23
637 97.36 wind 1.0 10 > th dose independent rect. 15 16
639 97.36 wind 5.0 10 > th dose dependent rect. 9 2
658 97.39 humidity 90.0 1440 < th dose independent rect. 10 1
665 97.40 wind 9.0 720 < th dose independent rect. 19 7
673 97.41 humidity 90.0 720 < th dose independent rect. 7 6
674 97.41 precipitation 0.1 720 < th dose independent rect. 11 8
675 97.41 precipitation 0.1 720 < th dose dependent rect. 11 8
677 97.42 wind 1.0 10 > th dose independent rect. 5 23
699 97.43 precipitation 0.1 720 < th dose independent rect. 23 8
705 97.43 precipitation 0.1 720 < th dose dependent rect. 23 8
710 97.44 precipitation 0.1 720 < th dose independent rect. 7 7
712 97.44 precipitation 0.1 720 < th dose dependent rect. 7 7
716 97.46 temperature 10.0 720 > th dose independent rect. 19 7
717 97.46 temperature 30.0 720 < th dose independent rect. 19 7
718 97.46 humidity 50.0 720 > th dose independent rect. 19 7
719 97.46 atmosphere 995.0 720 > th dose independent rect. 19 7
720 97.46 radiation 1.0 720 < th dose independent rect. 19 7
725 97.46 temperature 10.0 720 > th dose independent rect. 2 17
729 97.46 radiation 1.0 720 < th dose dependent rect. 19 7
744 97.47 temperature 10.0 720 > th dose independent rect. 7 7
745 97.47 atmosphere 995.0 720 > th dose independent rect. 7 7
746 97.47 atmosphere 1015.0 720 < th dose independent rect. 7 7
748 97.47 wind 9.0 30 > th dose independent rect. 1 10
753 97.47 temperature 10.0 720 > th dose independent rect. 14 17
754 97.47 atmosphere 995.0 720 > th dose independent rect. 14 17
768 97.48 wind 5.0 10 > th dose independent rect. 10 1
773 97.48 humidity 90.0 30 < th dose independent rect. 21 10
795 97.49 humidity 60.0 10 < th dose independent rect. 10 1
802 97.49 humidity 60.0 10 < th dose dependent rect. 10 1
825 97.51 temperature 10.0 10 > th dose dependent rect. 24 1
833 97.52 wind 5.0 90 < th dose dependent rect. 8 16
900 97.55 humidity 50.0 720 > th dose independent rect. 7 7
902 97.55 atmosphere 995.0 720 > th dose independent rect. 2 17
941 97.58 precipitation 0.1 10 < th dose independent rect. 1 5
946 97.58 precipitation 0.1 10 < th dose dependent rect. 1 5
950 97.59 wind 9.0 43200 < th dose independent rect. 24 2
972 97.61 precipitation 0.1 1440 < th dose independent rect. 5 2
974 97.61 precipitation 0.1 1440 < th dose dependent rect. 5 2
979 97.62 radiation 1.0 720 > th dose independent rect. 7 6
997 97.64 temperature 30.0 10 < th dose dependent rect. 24 1