Os11g0245900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0245900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.09 | 0.282 | 14.7 | -0.0128 | 0.699 | 0.881 | 0.28 | -0.909 | 0.0306 | 23.1 | 16.69 | 3966 | -- | -- |
| 36.79 | 0.283 | 14.6 | 0.205 | 0.696 | 0.933 | 0.342 | -- | 0.0769 | 23.2 | 15.56 | 3975 | -- | -- |
| 36.42 | 0.281 | 14.7 | -0.0138 | 0.696 | 0.878 | -- | -0.864 | 0.0315 | 23.1 | 16.89 | 3980 | -- | -- |
| 36.93 | 0.283 | 14.6 | 0.183 | 0.697 | 0.951 | -- | -- | 0.0882 | 23.1 | 14.58 | 3992 | -- | -- |
| 63.17 | 0.37 | 14.7 | -0.0441 | -- | 1.05 | -- | -0.957 | -0.0141 | -- | 17.53 | 2361 | -- | -- |
| 52.79 | 0.341 | 14.6 | 0.616 | 0.763 | -- | 0.281 | -- | 0.274 | 23.3 | -- | -- | -- | -- |
| 53.13 | 0.341 | 14.6 | 0.604 | 0.762 | -- | -- | -- | 0.273 | 23.3 | -- | -- | -- | -- |
| 60.43 | 0.362 | 14.6 | 0.283 | -- | 1.22 | -- | -- | 0.0706 | -- | 16.87 | 895 | -- | -- |
| 37.58 | 0.286 | 14.6 | -- | 0.705 | 1.03 | -- | -- | 0.0546 | 23.1 | 14.61 | 4071 | -- | -- |
| 89.47 | 0.442 | 14.6 | 0.624 | -- | -- | -- | -- | 0.281 | -- | -- | -- | -- | -- |
| 62.75 | 0.371 | 14.6 | -- | 0.768 | -- | -- | -- | 0.206 | 23.4 | -- | -- | -- | -- |
| 62.06 | 0.367 | 14.6 | -- | -- | 1.34 | -- | -- | 0.021 | -- | 16.29 | 904 | -- | -- |
| 99.72 | 0.466 | 14.6 | -- | -- | -- | -- | -- | 0.211 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.82 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 2 | 35.85 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 4 | 36.11 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 5 | 36.13 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 6 | 36.19 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 16 | 36.26 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 12 |
| 19 | 36.29 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 3 |
| 26 | 36.31 | temperature | 15 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 31 | 36.32 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 8 |
| 35 | 36.33 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 5 |
| 49 | 36.35 | temperature | 20 | 4320 | > th | dose dependent | sin | 22 | NA |
| 59 | 36.36 | temperature | 15 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 61 | 36.36 | temperature | 15 | 4320 | > th | dose dependent | rect. | 14 | 9 |
| 65 | 36.37 | temperature | 15 | 4320 | > th | dose dependent | rect. | 16 | 7 |
| 72 | 36.38 | temperature | 15 | 4320 | > th | dose dependent | rect. | 3 | 20 |
| 74 | 36.39 | temperature | 20 | 4320 | > th | dose dependent | rect. | 14 | 5 |
| 83 | 36.39 | temperature | 15 | 4320 | > th | dose dependent | rect. | 8 | 20 |
| 97 | 36.40 | temperature | 15 | 4320 | > th | dose dependent | sin | 17 | NA |
| 127 | 36.41 | temperature | 15 | 4320 | > th | dose dependent | rect. | 10 | 18 |
| 162 | 36.42 | temperature | 15 | 4320 | > th | dose dependent | rect. | 14 | 21 |
| 173 | 36.43 | temperature | 15 | 4320 | > th | dose dependent | no | NA | NA |
| 193 | 36.43 | temperature | 15 | 4320 | > th | dose dependent | rect. | 10 | 23 |
| 195 | 36.43 | temperature | 15 | 4320 | > th | dose dependent | rect. | 16 | 23 |
| 196 | 36.43 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 23 |
| 206 | 36.44 | temperature | 15 | 4320 | > th | dose dependent | rect. | 12 | 15 |
| 227 | 36.45 | temperature | 30 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 549 | 36.54 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 641 | 36.57 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 5 |
| 713 | 36.60 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 736 | 36.61 | radiation | 20 | 4320 | < th | dose independent | rect. | 16 | 15 |
| 813 | 36.64 | temperature | 20 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 843 | 36.65 | radiation | 10 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 872 | 36.66 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 18 |