Os11g0243400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0243400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 294.59 | 0.806 | 4.37 | 0.618 | 0.438 | -0.893 | 0.96 | -1.83 | 0.413 | 7.95 | 22.59 | 1322 | -- | -- |
| 303.35 | 0.811 | 4.41 | 0.0111 | 0.425 | -0.839 | 1.1 | -- | 0.341 | 7.51 | 22.5 | 1299 | -- | -- |
| 297.07 | 0.803 | 4.37 | 0.684 | 0.452 | -0.873 | -- | -1.84 | 0.429 | 8.31 | 22.5 | 1309 | -- | -- |
| 305.15 | 0.814 | 4.4 | 0.0521 | 0.517 | -0.894 | -- | -- | 0.286 | 8.63 | 22.6 | 1227 | -- | -- |
| 307.05 | 0.816 | 4.36 | 0.757 | -- | -0.914 | -- | -2.08 | 0.485 | -- | 22.21 | 1361 | -- | -- |
| 337.29 | 0.861 | 4.36 | 0.306 | 0.426 | -- | 1.21 | -- | 0.581 | 7.09 | -- | -- | -- | -- |
| 340.47 | 0.864 | 4.36 | 0.334 | 0.436 | -- | -- | -- | 0.58 | 8.01 | -- | -- | -- | -- |
| 315.85 | 0.828 | 4.44 | 0.0067 | -- | -0.914 | -- | -- | 0.257 | -- | 22.6 | 1376 | -- | -- |
| 304.64 | 0.813 | 4.43 | -- | 0.454 | -0.927 | -- | -- | 0.248 | 8.74 | 22.54 | 1287 | -- | -- |
| 350.85 | 0.875 | 4.37 | 0.338 | -- | -- | -- | -- | 0.586 | -- | -- | -- | -- | -- |
| 343.4 | 0.867 | 4.37 | -- | 0.438 | -- | -- | -- | 0.543 | 7.95 | -- | -- | -- | -- |
| 315.83 | 0.828 | 4.45 | -- | -- | -0.923 | -- | -- | 0.253 | -- | 22.54 | 1400 | -- | -- |
| 353.86 | 0.878 | 4.38 | -- | -- | -- | -- | -- | 0.548 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 281.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 23 |
| 102 | 295.68 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 127 | 296.68 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 129 | 296.79 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 23 |
| 130 | 296.80 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 136 | 296.98 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 141 | 297.08 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 142 | 297.09 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 151 | 297.21 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 164 | 297.32 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 179 | 297.46 | temperature | 25 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 195 | 297.80 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 317 | 299.90 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 338 | 300.19 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 356 | 300.56 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 9 |
| 357 | 300.58 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 389 | 301.08 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 394 | 301.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 424 | 301.45 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 11 |
| 429 | 301.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 3 |
| 434 | 301.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 20 |
| 442 | 301.66 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 456 | 301.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 457 | 301.73 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 459 | 301.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 460 | 301.76 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 473 | 301.83 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 490 | 301.96 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 497 | 301.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 547 | 302.24 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 9 |
| 562 | 302.27 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 570 | 302.29 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 10 |
| 577 | 302.31 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 599 | 302.37 | wind | 9 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 648 | 302.57 | temperature | 25 | 720 | < th | dose dependent | sin | 12 | NA |
| 687 | 302.75 | temperature | 15 | 720 | > th | dose dependent | sin | 11 | NA |
| 704 | 302.80 | temperature | 25 | 10 | < th | dose dependent | sin | 5 | NA |
| 725 | 302.87 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 745 | 302.95 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 780 | 303.03 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 17 |
| 799 | 303.10 | wind | 3 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 813 | 303.13 | temperature | 25 | 30 | < th | dose independent | rect. | 21 | 22 |
| 828 | 303.17 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 854 | 303.24 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 3 |
| 868 | 303.27 | temperature | 25 | 270 | < th | dose dependent | sin | 8 | NA |
| 938 | 303.46 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 954 | 303.50 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 2 |