Os11g0241900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os11g0241900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.58 | 0.242 | 9.79 | 0.298 | 1.3 | 1.49 | 0.26 | -0.679 | 0.168 | 21 | 1.659 | 955 | -- | -- |
| 26.78 | 0.241 | 9.79 | 0.32 | 1.35 | 1.59 | 0.503 | -- | 0.167 | 20.8 | 1.193 | 938 | -- | -- |
| 26.63 | 0.24 | 9.78 | 0.306 | 1.27 | 1.44 | -- | -1.06 | 0.174 | 21.1 | 1.765 | 963 | -- | -- |
| 28.06 | 0.247 | 9.79 | 0.255 | 1.27 | 1.45 | -- | -- | 0.152 | 21 | 1.373 | 957 | -- | -- |
| 30.67 | 0.259 | 9.77 | 0.123 | -- | 0.413 | -- | 0.152 | 0.0914 | -- | 3.096 | 4653 | -- | -- |
| 32.74 | 0.268 | 9.79 | 0.119 | 0.507 | -- | 0.293 | -- | 0.0737 | 23.7 | -- | -- | -- | -- |
| 33.1 | 0.269 | 9.79 | 0.107 | 0.505 | -- | -- | -- | 0.0721 | 23.8 | -- | -- | -- | -- |
| 30.82 | 0.26 | 9.77 | 0.124 | -- | 0.413 | -- | -- | 0.0921 | -- | 3.096 | 4653 | -- | -- |
| 29.61 | 0.253 | 9.8 | -- | 1.2 | 1.35 | -- | -- | 0.123 | 21 | 1.678 | 938 | -- | -- |
| 49.18 | 0.328 | 9.77 | 0.122 | -- | -- | -- | -- | 0.0786 | -- | -- | -- | -- | -- |
| 33.4 | 0.27 | 9.79 | -- | 0.507 | -- | -- | -- | 0.0602 | 23.8 | -- | -- | -- | -- |
| 30.43 | 0.258 | 9.78 | -- | -- | 0.438 | -- | -- | 0.0754 | -- | 7.127 | 4646 | -- | -- |
| 49.57 | 0.329 | 9.78 | -- | -- | -- | -- | -- | 0.065 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.92 | wind | 7 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 2 | 24.95 | wind | 7 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 5 | 25.23 | wind | 5 | 14400 | > th | dose dependent | rect. | 11 | 10 |
| 7 | 25.28 | wind | 5 | 14400 | > th | dose dependent | rect. | 11 | 8 |
| 8 | 25.30 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 5 |
| 9 | 25.32 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 11 | 25.34 | wind | 5 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 27 | 25.39 | wind | 5 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 65 | 25.57 | wind | 5 | 14400 | > th | dose dependent | sin | 21 | NA |
| 96 | 25.66 | wind | 5 | 14400 | > th | dose independent | rect. | 10 | 12 |
| 101 | 25.66 | wind | 5 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 106 | 25.69 | wind | 5 | 14400 | > th | dose dependent | rect. | 5 | 14 |
| 130 | 25.75 | wind | 5 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 170 | 25.82 | wind | 5 | 14400 | > th | dose independent | rect. | 5 | 14 |
| 173 | 25.83 | wind | 5 | 14400 | > th | dose independent | sin | 22 | NA |
| 184 | 25.84 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 199 | 25.87 | wind | 5 | 14400 | < th | dose independent | rect. | 10 | 12 |
| 219 | 25.90 | wind | 5 | 14400 | < th | dose independent | rect. | 5 | 16 |
| 281 | 25.98 | wind | 5 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 297 | 26.00 | wind | 5 | 14400 | < th | dose independent | sin | 23 | NA |
| 325 | 26.03 | wind | 5 | 14400 | > th | dose independent | rect. | 10 | 20 |
| 504 | 26.17 | wind | 5 | 14400 | < th | dose independent | rect. | 10 | 20 |
| 565 | 26.22 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 681 | 26.28 | wind | 5 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 723 | 26.31 | wind | 5 | 14400 | > th | dose independent | rect. | 20 | 23 |
| 784 | 26.36 | wind | 5 | 14400 | > th | dose independent | no | NA | NA |
| 799 | 26.36 | wind | 5 | 14400 | > th | dose dependent | no | NA | NA |
| 854 | 26.39 | wind | 5 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 866 | 26.40 | wind | 5 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 947 | 26.47 | wind | 5 | 14400 | < th | dose independent | no | NA | NA |