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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0239900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.95 (0.0265) R2 : 0.00478
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0827 (0.0559) R2dN8 : 0.00617 R2N8 : 0.00478
σ : 0.5
deviance : 114.64
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
111.52 0.496 2.95 -0.0536 0.242 0.225 0.34 0.124 0.0794 13.2 81 83 -- --
111.58 0.492 2.95 -0.0519 0.238 0.218 0.273 -- 0.0765 13.1 81.01 82 -- --
111.84 0.493 2.94 -0.023 0.231 0.221 -- -0.0217 0.091 13.5 79.59 117 -- --
111.83 0.493 2.94 -0.0428 0.233 0.215 -- -- 0.0816 13.1 81 82 -- --
113.49 0.496 2.94 -0.0349 -- 0.11 -- -0.00036 0.0887 -- 76 128 -- --
114.11 0.501 2.95 -0.0461 0.0846 -- 0.138 -- 0.0776 9.39 -- -- -- --
114.16 0.5 2.95 -0.0419 0.088 -- -- -- 0.0773 8.54 -- -- -- --
113.47 0.496 2.95 -0.0387 -- 0.108 -- -- 0.0761 -- 76.22 124 -- --
111.86 0.493 2.94 -- 0.237 0.221 -- -- 0.0856 13.2 81 82 -- --
114.59 0.5 2.95 -0.0415 -- -- -- -- 0.0781 -- -- -- -- --
114.2 0.5 2.94 -- 0.0878 -- -- -- 0.0819 8.57 -- -- -- --
113.51 0.496 2.95 -- -- 0.108 -- -- 0.0804 -- 76.03 124 -- --
114.64 0.5 2.95 -- -- -- -- -- 0.0827 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 104.49 temperature 25.0 720 > th dose independent rect. 4 1
4 106.87 temperature 25.0 1440 < th dose independent rect. 4 1
6 107.13 temperature 25.0 720 > th dose dependent rect. 4 2
9 107.46 temperature 25.0 90 > th dose independent rect. 4 1
13 107.67 precipitation 0.1 90 > th dose independent rect. 13 1
17 107.67 precipitation 0.1 90 > th dose dependent rect. 13 1
21 107.74 temperature 25.0 90 > th dose dependent rect. 4 1
25 107.79 radiation 10.0 10 < th dose dependent rect. 14 1
29 107.86 radiation 10.0 10 < th dose independent rect. 14 1
31 107.89 humidity 90.0 10 < th dose independent rect. 4 1
60 108.18 humidity 80.0 90 > th dose dependent rect. 10 4
61 108.27 wind 1.0 30 > th dose dependent rect. 4 1
94 108.77 wind 1.0 90 > th dose independent rect. 4 1
106 108.96 humidity 80.0 10 > th dose independent rect. 11 3
124 109.10 atmosphere 1005.0 90 > th dose dependent rect. 4 1
126 109.16 temperature 25.0 10 < th dose dependent rect. 13 1
157 109.30 wind 9.0 90 < th dose independent rect. 5 23
178 109.39 temperature 10.0 90 > th dose dependent rect. 4 1
180 109.39 temperature 10.0 30 > th dose dependent rect. 6 22
200 109.50 wind 3.0 90 < th dose independent rect. 4 1
203 109.52 temperature 25.0 720 < th dose independent rect. 1 1
215 109.57 wind 9.0 10 < th dose independent rect. 21 23
218 109.60 humidity 90.0 720 < th dose independent rect. 6 3
228 109.65 wind 7.0 90 < th dose dependent rect. 4 1
234 109.67 wind 9.0 10 < th dose independent rect. 5 23
236 109.68 atmosphere 1005.0 90 > th dose independent rect. 4 1
244 109.71 humidity 90.0 10 < th dose independent rect. 2 4
245 109.71 humidity 90.0 90 < th dose dependent rect. 4 1
250 109.73 precipitation 0.1 90 < th dose independent rect. 4 1
253 109.73 precipitation 0.1 90 < th dose dependent rect. 4 1
265 109.77 temperature 10.0 90 > th dose independent rect. 4 1
267 109.77 temperature 30.0 90 < th dose independent rect. 4 1
268 109.77 humidity 50.0 90 > th dose independent rect. 4 1
272 109.77 atmosphere 995.0 90 > th dose independent rect. 4 1
274 109.77 atmosphere 1010.0 90 < th dose independent rect. 4 1
276 109.77 radiation 20.0 90 < th dose independent rect. 4 1
279 109.77 temperature 10.0 90 > th dose independent rect. 5 23
280 109.77 radiation 30.0 90 < th dose dependent rect. 4 1
286 109.79 radiation 1.0 90 < th dose independent rect. 4 1
289 109.79 atmosphere 995.0 90 > th dose independent rect. 5 23
290 109.79 humidity 90.0 10 < th dose dependent rect. 4 1
309 109.85 temperature 10.0 90 > th dose dependent rect. 6 13
310 109.88 temperature 25.0 720 < th dose independent rect. 24 6
316 109.90 wind 7.0 1440 < th dose independent rect. 5 1
318 109.90 temperature 10.0 1440 > th dose independent rect. 5 1
325 109.90 humidity 50.0 1440 > th dose independent rect. 5 1
334 109.90 atmosphere 995.0 1440 > th dose independent rect. 5 1
335 109.90 atmosphere 1015.0 1440 < th dose independent rect. 5 1
336 109.90 radiation 20.0 1440 < th dose independent rect. 5 1
347 109.90 temperature 10.0 1440 > th dose independent rect. 6 23
364 109.95 temperature 15.0 270 > th dose independent rect. 5 11
371 109.97 temperature 15.0 10 > th dose dependent rect. 4 2
375 109.98 humidity 50.0 90 > th dose dependent rect. 4 1
383 110.01 humidity 90.0 720 < th dose independent rect. 5 6
395 110.05 precipitation 0.1 90 < th dose independent rect. 5 23
398 110.05 precipitation 0.1 90 < th dose dependent rect. 5 23
399 110.06 temperature 25.0 10 < th dose independent rect. 12 2
405 110.07 radiation 40.0 14400 < th dose dependent rect. 23 1
408 110.08 atmosphere 1005.0 10 > th dose independent rect. 4 1
419 110.10 temperature 15.0 720 > th dose independent rect. 5 4
426 110.12 temperature 25.0 90 < th dose independent rect. 12 1
435 110.14 atmosphere 1015.0 720 < th dose independent rect. 23 18
437 110.14 humidity 80.0 30 > th dose dependent rect. 4 1
440 110.14 radiation 10.0 10 < th dose dependent rect. 8 7
441 110.15 wind 7.0 10 < th dose independent rect. 6 10
458 110.17 temperature 15.0 90 > th dose independent rect. 6 13
459 110.17 temperature 30.0 30 < th dose dependent rect. 4 1
489 110.18 atmosphere 1015.0 30 < th dose dependent rect. 4 1
508 110.20 wind 7.0 10 < th dose independent rect. 6 13
540 110.23 wind 9.0 10 < th dose dependent rect. 6 10
541 110.24 wind 9.0 1440 < th dose independent rect. 23 1
542 110.24 temperature 10.0 1440 > th dose independent rect. 23 1
550 110.24 humidity 50.0 1440 > th dose independent rect. 23 1
560 110.24 atmosphere 995.0 1440 > th dose independent rect. 23 1
561 110.24 radiation 1.0 1440 < th dose independent rect. 23 1
582 110.24 temperature 10.0 1440 > th dose independent rect. 24 23
587 110.24 radiation 1.0 1440 < th dose dependent rect. 23 1
595 110.25 atmosphere 1015.0 720 < th dose independent rect. 23 10
635 110.29 temperature 25.0 30 > th dose independent rect. 22 1
636 110.29 atmosphere 1005.0 30 > th dose independent rect. 22 1
641 110.30 atmosphere 1000.0 30 > th dose dependent rect. 22 1
656 110.32 precipitation 0.1 30 < th dose independent rect. 22 1
659 110.32 temperature 15.0 30 > th dose dependent rect. 22 1
661 110.32 precipitation 0.1 30 < th dose dependent rect. 22 1
663 110.33 humidity 80.0 30 > th dose independent rect. 22 1
664 110.33 humidity 90.0 30 < th dose independent rect. 22 1
687 110.33 humidity 90.0 270 < th dose independent rect. 5 12
694 110.34 atmosphere 995.0 1440 > th dose independent rect. 17 14
697 110.35 wind 7.0 30 < th dose independent rect. 22 1
699 110.35 temperature 10.0 30 > th dose independent rect. 22 1
701 110.35 temperature 30.0 30 < th dose independent rect. 22 1
702 110.35 humidity 50.0 30 > th dose independent rect. 22 1
706 110.35 atmosphere 1010.0 30 < th dose independent rect. 22 1
708 110.35 radiation 1.0 30 < th dose independent rect. 22 1
714 110.35 temperature 10.0 30 > th dose independent rect. 23 23
716 110.35 wind 7.0 30 < th dose dependent rect. 22 1
718 110.35 radiation 1.0 30 < th dose dependent rect. 22 1
733 110.37 humidity 50.0 30 > th dose dependent rect. 22 1
745 110.38 wind 9.0 10 < th dose dependent rect. 6 13
746 110.39 wind 1.0 30 > th dose independent rect. 22 1
758 110.41 atmosphere 1010.0 270 > th dose independent rect. 12 1
787 110.43 wind 9.0 30 < th dose dependent rect. 6 22
790 110.44 radiation 10.0 10 < th dose dependent rect. 6 9
793 110.45 temperature 30.0 30 < th dose dependent rect. 20 1
800 110.46 temperature 15.0 720 > th dose independent rect. 5 6
805 110.47 humidity 80.0 90 > th dose independent rect. 11 1
816 110.49 wind 1.0 30 > th dose independent rect. 19 11
817 110.49 humidity 90.0 30 < th dose dependent rect. 22 1
819 110.50 humidity 80.0 90 > th dose independent rect. 10 13
826 110.51 temperature 25.0 10 > th dose independent rect. 20 10
827 110.51 wind 1.0 30 > th dose dependent rect. 22 1
830 110.52 temperature 30.0 720 < th dose independent rect. 17 4
842 110.54 atmosphere 1015.0 30 < th dose dependent rect. 22 1
855 110.58 humidity 90.0 270 > th dose independent rect. 8 1
883 110.62 temperature 30.0 30 < th dose dependent rect. 22 1
890 110.63 atmosphere 1015.0 1440 < th dose independent rect. 14 5
891 110.63 wind 1.0 10 > th dose independent rect. 16 14
892 110.63 wind 5.0 30 < th dose dependent rect. 20 1
893 110.63 humidity 80.0 10 > th dose dependent rect. 14 1
897 110.64 atmosphere 1015.0 1440 > th dose independent rect. 14 1
904 110.64 radiation 10.0 270 < th dose independent rect. 19 19
906 110.64 atmosphere 1015.0 1440 > th dose dependent rect. 14 1
921 110.66 wind 3.0 30 < th dose independent rect. 20 1
935 110.66 radiation 20.0 90 < th dose dependent rect. 19 20
947 110.68 atmosphere 1015.0 1440 < th dose independent rect. 14 3
948 110.68 humidity 80.0 90 > th dose independent rect. 19 20
953 110.69 atmosphere 1015.0 1440 < th dose independent rect. 14 1
966 110.70 humidity 50.0 10 > th dose dependent rect. 20 1
969 110.71 humidity 80.0 10 > th dose independent rect. 20 1
973 110.71 humidity 80.0 30 > th dose independent rect. 4 20
979 110.71 temperature 10.0 720 > th dose dependent rect. 6 3
983 110.71 radiation 1.0 720 < th dose dependent rect. 18 17
984 110.72 radiation 1.0 720 > th dose independent rect. 6 3
987 110.72 humidity 50.0 90 > th dose independent rect. 5 23
991 110.72 atmosphere 995.0 10 > th dose dependent rect. 20 1
992 110.72 atmosphere 1015.0 30 < th dose dependent rect. 20 1
998 110.73 wind 1.0 10 > th dose independent rect. 20 1