Os11g0238700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
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Os11g0238700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disease resistance protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.97 | 0.538 | 3.15 | 0.61 | 0.271 | 0.964 | 0.152 | 1.95 | 0.52 | 8.61 | 62.21 | 6044 | -- | -- |
| 135.9 | 0.543 | 3.15 | 0.809 | 0.243 | 0.992 | 0.235 | -- | 0.65 | 8.96 | 69 | 6138 | -- | -- |
| 131.03 | 0.533 | 3.15 | 0.605 | 0.269 | 0.961 | -- | 1.94 | 0.525 | 8.5 | 63 | 6062 | -- | -- |
| 136.06 | 0.543 | 3.15 | 0.813 | 0.242 | 0.992 | -- | -- | 0.651 | 8.88 | 69 | 6128 | -- | -- |
| 133.33 | 0.538 | 3.15 | 0.588 | -- | 1.01 | -- | 1.92 | 0.544 | -- | 64 | 6389 | -- | -- |
| 151.9 | 0.578 | 3.23 | 0.936 | 0.308 | -- | 0.177 | -- | 0.286 | 8.04 | -- | -- | -- | -- |
| 151.99 | 0.577 | 3.23 | 0.941 | 0.309 | -- | -- | -- | 0.286 | 7.93 | -- | -- | -- | -- |
| 138.12 | 0.547 | 3.15 | 0.804 | -- | 1.06 | -- | -- | 0.666 | -- | 69.1 | 6381 | -- | -- |
| 152.9 | 0.576 | 3.15 | -- | 0.232 | 1.13 | -- | -- | 0.654 | 8.68 | 72.93 | 6153 | -- | -- |
| 157.18 | 0.586 | 3.24 | 0.944 | -- | -- | -- | -- | 0.29 | -- | -- | -- | -- | -- |
| 175.32 | 0.619 | 3.25 | -- | 0.316 | -- | -- | -- | 0.181 | 7.72 | -- | -- | -- | -- |
| 154.52 | 0.579 | 3.15 | -- | -- | 1.2 | -- | -- | 0.671 | -- | 73 | 6358 | -- | -- |
| 180.69 | 0.627 | 3.26 | -- | -- | -- | -- | -- | 0.185 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.53 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 3 | 124.59 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 8 | 125.51 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 20 | 126.51 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 23 | 126.61 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 24 | 126.61 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 27 | 126.76 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 36 | 127.06 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 15 |
| 37 | 127.06 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 15 |
| 38 | 127.09 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 15 |
| 48 | 127.27 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 49 | 127.31 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 15 |
| 52 | 127.40 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 66 | 127.54 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 67 | 127.55 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 70 | 127.80 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 74 | 127.85 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 84 | 128.01 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 15 |
| 89 | 128.04 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 7 |
| 96 | 128.10 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 99 | 128.16 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 108 | 128.26 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 130 | 128.52 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 8 |
| 164 | 128.83 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 10 |
| 174 | 128.93 | wind | 1.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 201 | 129.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 204 | 129.15 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 11 |
| 205 | 129.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 214 | 129.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 216 | 129.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 4 |
| 223 | 129.28 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 240 | 129.43 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 253 | 129.51 | wind | 1.0 | 14400 | > th | dose independent | rect. | 3 | 8 |
| 256 | 129.54 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 261 | 129.56 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 16 |
| 268 | 129.60 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 2 | 18 |
| 270 | 129.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 23 | 21 |
| 272 | 129.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 2 | 18 |
| 273 | 129.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 2 | 18 |
| 278 | 129.65 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 280 | 129.65 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 12 |
| 287 | 129.70 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 23 | 21 |
| 293 | 129.73 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 5 |
| 294 | 129.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 23 | 21 |
| 298 | 129.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 23 | 21 |
| 317 | 129.81 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 318 | 129.81 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 5 |
| 321 | 129.81 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 5 |
| 334 | 129.87 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 350 | 129.92 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 354 | 129.92 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 379 | 130.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 4 |
| 389 | 130.10 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 4 | NA |
| 390 | 130.10 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 4 | NA |
| 391 | 130.10 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 4 | NA |
| 409 | 130.16 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 419 | 130.20 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 425 | 130.22 | wind | 3.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 451 | 130.27 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 459 | 130.29 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 12 |
| 465 | 130.29 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 12 |
| 532 | 130.48 | wind | 1.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 577 | 130.58 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 5 | NA |
| 592 | 130.63 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 595 | 130.63 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 671 | 130.83 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 734 | 130.99 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 744 | 131.05 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 806 | 131.19 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 807 | 131.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 844 | 131.25 | wind | 1.0 | 14400 | < th | dose independent | rect. | 3 | 8 |
| 877 | 131.29 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 894 | 131.32 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 933 | 131.41 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 11 |
| 970 | 131.48 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 983 | 131.52 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |