Os11g0238400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0238400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.69 | 0.381 | 3.03 | 0.0925 | 0.159 | -0.138 | -0.285 | 1.28 | 0.159 | 5.62 | 1.006 | 16 | -- | -- |
| 66.96 | 0.384 | 3.02 | 0.141 | 0.161 | -0.0603 | -0.475 | -- | 0.173 | 5.1 | 1.006 | 16 | -- | -- |
| 65.63 | 0.38 | 3.03 | 0.08 | 0.158 | -0.16 | -- | 1.24 | 0.163 | 6.57 | 1.006 | 16 | -- | -- |
| 67.33 | 0.385 | 3.01 | 0.142 | 0.171 | -0.06 | -- | -- | 0.176 | 6.43 | 1 | 14 | -- | -- |
| 66.82 | 0.383 | 3.03 | 0.074 | -- | -0.219 | -- | 1.3 | 0.166 | -- | 1.006 | 16 | -- | -- |
| 67.08 | 0.384 | 3.02 | 0.148 | 0.18 | -- | -0.455 | -- | 0.172 | 5.17 | -- | -- | -- | -- |
| 67.44 | 0.385 | 3.01 | 0.149 | 0.186 | -- | -- | -- | 0.175 | 6.22 | -- | -- | -- | -- |
| 68.42 | 0.385 | 3.02 | 0.114 | -- | -0.0984 | -- | -- | 0.172 | -- | 2.9 | 10 | -- | -- |
| 67.86 | 0.386 | 3.02 | -- | 0.169 | -0.0729 | -- | -- | 0.16 | 6.43 | 1.1 | 16 | -- | -- |
| 69.23 | 0.389 | 3.02 | 0.154 | -- | -- | -- | -- | 0.179 | -- | -- | -- | -- | -- |
| 68.02 | 0.386 | 3.02 | -- | 0.188 | -- | -- | -- | 0.158 | 6.18 | -- | -- | -- | -- |
| 68.64 | 0.387 | 3.02 | -- | -- | -0.11 | -- | -- | 0.17 | -- | 2.824 | 13 | -- | -- |
| 69.86 | 0.39 | 3.02 | -- | -- | -- | -- | -- | 0.162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.26 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 3 | 57.29 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 4 | 57.30 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 6 | 57.32 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 10 | 57.36 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 11 | 57.36 | wind | 7.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 17 | 57.41 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 19 | 57.41 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 20 | 57.41 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 24 | 57.41 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 26 | 57.41 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 31 | 57.41 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 32 | 57.41 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 33 | 57.41 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 38 | 57.41 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 42 | 57.43 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 48 | 57.73 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 49 | 57.83 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 52 | 58.10 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 97 | 58.93 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 100 | 59.19 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 101 | 59.19 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 104 | 59.19 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 108 | 59.19 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 117 | 59.19 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 118 | 59.19 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 138 | 59.19 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 139 | 59.19 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 142 | 59.19 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 160 | 59.45 | temperature | 25.0 | 720 | > th | dose independent | rect. | 1 | 1 |
| 168 | 60.07 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 172 | 60.21 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 173 | 60.22 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 175 | 60.24 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 177 | 60.27 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 186 | 60.65 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 192 | 60.89 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 197 | 60.98 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 1 | 1 |
| 217 | 61.32 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 218 | 61.32 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 272 | 62.17 | temperature | 25.0 | 720 | < th | dose independent | rect. | 23 | 7 |
| 304 | 62.48 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 348 | 62.97 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 386 | 63.24 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 441 | 63.66 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 443 | 63.69 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 451 | 63.73 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 3 |
| 486 | 63.78 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 555 | 64.09 | humidity | 90.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 568 | 64.12 | temperature | 25.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 596 | 64.23 | wind | 1.0 | 30 | < th | dose independent | rect. | 24 | 3 |
| 606 | 64.25 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 638 | 64.37 | temperature | 25.0 | 720 | > th | dose independent | sin | 11 | NA |
| 701 | 64.51 | temperature | 25.0 | 720 | < th | dose independent | sin | 10 | NA |
| 709 | 64.53 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 710 | 64.54 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 779 | 64.71 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 793 | 64.74 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 2 |
| 867 | 64.89 | wind | 3.0 | 720 | < th | dose independent | rect. | 2 | 1 |
| 906 | 64.95 | wind | 1.0 | 10 | < th | dose independent | rect. | 13 | 14 |
| 933 | 64.97 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 6 |
| 950 | 65.00 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 958 | 65.01 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 982 | 65.05 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 990 | 65.05 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 21 |