Os11g0237900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
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Os11g0237900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disease resistance protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 136.17 | 0.548 | 5.22 | 0.115 | 0.0828 | -0.0772 | -0.813 | -3.33 | -0.328 | 4.46 | 31.58 | 1430 | -- | -- |
| 156.42 | 0.583 | 5.17 | 0.549 | 0.0686 | -0.278 | -0.837 | -- | -0.175 | 4.03 | 30.33 | 1206 | -- | -- |
| 137.89 | 0.547 | 5.21 | 0.117 | 0.0774 | -0.082 | -- | -3.4 | -0.325 | 4.39 | 31.67 | 1422 | -- | -- |
| 158.72 | 0.587 | 5.17 | 0.561 | 0.075 | -0.294 | -- | -- | -0.166 | 1.93 | 30.33 | 1206 | -- | -- |
| 138.21 | 0.548 | 5.21 | 0.121 | -- | -0.076 | -- | -3.39 | -0.323 | -- | 31.67 | 1422 | -- | -- |
| 159.44 | 0.592 | 5.18 | 0.513 | 0.0493 | -- | -0.949 | -- | -0.228 | 4.23 | -- | -- | -- | -- |
| 161.91 | 0.596 | 5.18 | 0.523 | 0.0516 | -- | -- | -- | -0.223 | 6.12 | -- | -- | -- | -- |
| 159.04 | 0.587 | 5.17 | 0.564 | -- | -0.276 | -- | -- | -0.168 | -- | 30.33 | 1206 | -- | -- |
| 166.87 | 0.602 | 5.19 | -- | 0.0779 | -0.262 | -- | -- | -0.24 | 1.95 | 35 | 1202 | -- | -- |
| 162.05 | 0.595 | 5.18 | 0.524 | -- | -- | -- | -- | -0.222 | -- | -- | -- | -- | -- |
| 169.11 | 0.608 | 5.19 | -- | 0.0596 | -- | -- | -- | -0.281 | 5.67 | -- | -- | -- | -- |
| 167.19 | 0.602 | 5.18 | -- | -- | -0.243 | -- | -- | -0.243 | -- | 35 | 1190 | -- | -- |
| 169.29 | 0.607 | 5.19 | -- | -- | -- | -- | -- | -0.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.62 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 2 | 130.62 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 3 | 130.97 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 6 | 131.15 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 13 |
| 7 | 131.16 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 8 | 131.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 9 | 131.20 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 13 | 131.20 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 21 |
| 14 | 131.22 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 26 | 131.45 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 18 |
| 28 | 131.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 29 | 131.48 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 22 |
| 30 | 131.49 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 16 |
| 47 | 131.74 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 76 | 131.94 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 91 | 132.04 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 102 | 132.09 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 141 | 132.27 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 142 | 132.27 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 143 | 132.28 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 147 | 132.30 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 152 | 132.34 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 153 | 132.34 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 163 | 132.39 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 185 | 132.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 186 | 132.53 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 202 | 132.60 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 22 |
| 218 | 132.68 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 225 | 132.71 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 228 | 132.74 | wind | 9.0 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 230 | 132.75 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 233 | 132.75 | wind | 9.0 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 234 | 132.75 | wind | 9.0 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 235 | 132.75 | wind | 9.0 | 43200 | > th | dose independent | rect. | 24 | 14 |
| 241 | 132.76 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 21 |
| 269 | 132.90 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 293 | 132.98 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 18 |
| 296 | 132.99 | wind | 9.0 | 43200 | < th | dose independent | rect. | 24 | 14 |
| 329 | 133.09 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 348 | 133.16 | humidity | 90.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 355 | 133.17 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 2 | 13 |
| 366 | 133.19 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 24 | 15 |
| 423 | 133.39 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 22 | 17 |
| 426 | 133.41 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 439 | 133.48 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 475 | 133.60 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 490 | 133.65 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 497 | 133.67 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 503 | 133.69 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 531 | 133.77 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 535 | 133.78 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 542 | 133.79 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 577 | 133.87 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 593 | 133.95 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 594 | 133.95 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 10 |
| 598 | 133.96 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 653 | 134.09 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 679 | 134.17 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 693 | 134.18 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 696 | 134.19 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 702 | 134.19 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 712 | 134.22 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 718 | 134.22 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 729 | 134.27 | humidity | 60.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 737 | 134.29 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 740 | 134.29 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 20 |
| 758 | 134.35 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 767 | 134.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 13 |
| 772 | 134.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 13 |
| 774 | 134.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 13 |
| 776 | 134.40 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 793 | 134.44 | humidity | 60.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 794 | 134.44 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 813 | 134.46 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 851 | 134.54 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 9 |
| 908 | 134.63 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 5 |
| 932 | 134.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 933 | 134.68 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 937 | 134.68 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 948 | 134.72 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 975 | 134.75 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 995 | 134.79 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 15 |