Os11g0237700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0237700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.03 | 0.319 | 11.1 | 0.156 | 1.37 | 0.686 | -0.462 | 1.08 | -0.293 | 20 | 0.66 | 270 | -- | -- |
| 48.33 | 0.324 | 11.1 | 0.143 | 1.37 | 0.718 | -0.658 | -- | -0.301 | 20.1 | -5.388 | 268 | -- | -- |
| 46.58 | 0.318 | 11.1 | 0.165 | 1.39 | 0.672 | -- | 1.18 | -0.293 | 20 | 0.6314 | 247 | -- | -- |
| 49.57 | 0.328 | 11.1 | 0.167 | 1.39 | 0.641 | -- | -- | -0.296 | 20 | 0.7311 | 260 | -- | -- |
| 75.06 | 0.404 | 11.1 | 0.0526 | -- | 1.63 | -- | -0.156 | -0.469 | -- | -3.469 | 818 | -- | -- |
| 54.37 | 0.346 | 11.1 | 0.184 | 1.49 | -- | -0.359 | -- | -0.249 | 18.9 | -- | -- | -- | -- |
| 54.7 | 0.346 | 11.1 | 0.191 | 1.49 | -- | -- | -- | -0.25 | 18.9 | -- | -- | -- | -- |
| 75.19 | 0.404 | 11.1 | 0.0604 | -- | 1.62 | -- | -- | -0.449 | -- | -5.426 | 814 | -- | -- |
| 50.3 | 0.33 | 11.1 | -- | 1.38 | 0.661 | -- | -- | -0.312 | 20 | 0.4807 | 263 | -- | -- |
| 171.15 | 0.611 | 11.1 | 0.159 | -- | -- | -- | -- | -0.278 | -- | -- | -- | -- | -- |
| 55.66 | 0.349 | 11.1 | -- | 1.49 | -- | -- | -- | -0.271 | 18.9 | -- | -- | -- | -- |
| 75.29 | 0.404 | 11.1 | -- | -- | 1.62 | -- | -- | -0.456 | -- | -5.333 | 814 | -- | -- |
| 171.82 | 0.612 | 11.1 | -- | -- | -- | -- | -- | -0.296 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.39 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 7 |
| 15 | 43.34 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 9 |
| 16 | 43.38 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 7 |
| 44 | 44.18 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 16 |
| 55 | 44.32 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 22 | 16 |
| 70 | 44.53 | temperature | 25.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 77 | 44.61 | radiation | 40.0 | 270 | < th | dose independent | rect. | 9 | 23 |
| 90 | 44.70 | temperature | 25.0 | 10 | > th | dose independent | rect. | 9 | 9 |
| 109 | 44.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 17 |
| 110 | 44.77 | temperature | 20.0 | 90 | > th | dose independent | rect. | 18 | 15 |
| 133 | 44.90 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 139 | 44.93 | temperature | 25.0 | 90 | > th | dose dependent | sin | 2 | NA |
| 147 | 44.97 | humidity | 90.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 169 | 45.13 | temperature | 25.0 | 270 | > th | dose independent | sin | 3 | NA |
| 171 | 45.13 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 212 | 45.27 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 232 | 45.34 | radiation | 1.0 | 270 | > th | dose dependent | sin | 2 | NA |
| 241 | 45.37 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 253 | 45.42 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 9 | 8 |
| 257 | 45.44 | radiation | 40.0 | 270 | < th | dose independent | rect. | 12 | 23 |
| 272 | 45.49 | radiation | 40.0 | 270 | < th | dose independent | sin | 7 | NA |
| 284 | 45.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 288 | 45.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 294 | 45.53 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 12 | 22 |
| 321 | 45.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 322 | 45.60 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 324 | 45.60 | radiation | 30.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 376 | 45.70 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 17 |
| 387 | 45.72 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 394 | 45.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 404 | 45.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 407 | 45.77 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 422 | 45.78 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 424 | 45.78 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 429 | 45.80 | humidity | 90.0 | 270 | < th | dose independent | rect. | 22 | 18 |
| 440 | 45.82 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 11 |
| 462 | 45.84 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 472 | 45.86 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 479 | 45.86 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 18 |
| 500 | 45.88 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 18 |
| 510 | 45.89 | radiation | 30.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 513 | 45.90 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 9 | 9 |
| 530 | 45.93 | radiation | 40.0 | 270 | > th | dose independent | sin | 6 | NA |
| 616 | 46.03 | radiation | 1.0 | 270 | > th | dose dependent | no | NA | NA |
| 655 | 46.03 | radiation | 30.0 | 270 | > th | dose dependent | rect. | 14 | 21 |
| 699 | 46.06 | radiation | 40.0 | 270 | > th | dose independent | rect. | 13 | 23 |
| 700 | 46.06 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 23 |
| 799 | 46.16 | radiation | 40.0 | 270 | > th | dose independent | rect. | 14 | 21 |
| 810 | 46.18 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 22 |
| 858 | 46.23 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 18 |
| 972 | 46.33 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 21 | 18 |