Os11g0236000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0236000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.31 | 0.241 | 8.91 | -0.137 | 0.52 | -1.31 | 0.206 | -1.07 | -0.133 | 18.4 | 16 | 343 | -- | -- |
| 26.96 | 0.242 | 8.89 | 0.0375 | 0.524 | -1.27 | -0.0335 | -- | -0.0856 | 18.4 | 17.04 | 361 | -- | -- |
| 26.38 | 0.239 | 8.91 | -0.116 | 0.515 | -1.33 | -- | -0.956 | -0.128 | 18.3 | 15.62 | 341 | -- | -- |
| 26.58 | 0.24 | 8.89 | -0.0226 | 0.539 | -1.14 | -- | -- | -0.0885 | 17.9 | 19.99 | 315 | -- | -- |
| 31.29 | 0.261 | 8.9 | -0.121 | -- | -1.04 | -- | -0.868 | -0.148 | -- | 13.72 | 1529 | -- | -- |
| 48.62 | 0.327 | 8.92 | -0.247 | 0.122 | -- | 0.526 | -- | -0.291 | 23.6 | -- | -- | -- | -- |
| 49.31 | 0.329 | 8.93 | -0.265 | 0.157 | -- | -- | -- | -0.291 | 21 | -- | -- | -- | -- |
| 30.54 | 0.257 | 8.89 | -0.0342 | -- | -0.794 | -- | -- | -0.0837 | -- | 21.19 | 1568 | -- | -- |
| 26.49 | 0.24 | 8.89 | -- | 0.544 | -1.14 | -- | -- | -0.0896 | 18.3 | 20 | 348 | -- | -- |
| 50.72 | 0.333 | 8.92 | -0.264 | -- | -- | -- | -- | -0.292 | -- | -- | -- | -- | -- |
| 51.16 | 0.335 | 8.92 | -- | 0.157 | -- | -- | -- | -0.261 | 20.9 | -- | -- | -- | -- |
| 30.31 | 0.256 | 8.89 | -- | -- | -0.765 | -- | -- | -0.113 | -- | 21.74 | 1558 | -- | -- |
| 52.56 | 0.338 | 8.92 | -- | -- | -- | -- | -- | -0.263 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.97 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 13 | 26.50 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 16 | 26.53 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 18 |
| 17 | 26.55 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 24 | 26.64 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 77 | 27.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 86 | 27.11 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 91 | 27.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 95 | 27.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 105 | 27.19 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 118 | 27.23 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 184 | 27.43 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 185 | 27.43 | temperature | 20 | 1440 | > th | dose dependent | sin | 5 | NA |
| 203 | 27.45 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 272 | 27.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 21 |
| 397 | 27.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 457 | 27.74 | temperature | 10 | 720 | > th | dose dependent | sin | 4 | NA |
| 535 | 27.81 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 592 | 27.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 606 | 27.87 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 615 | 27.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 20 |
| 627 | 27.89 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 7 |
| 940 | 28.08 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 942 | 28.08 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 5 |