Os11g0235700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0235700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 168.11 | 0.609 | 3.07 | 0.0887 | 0.0269 | 1.22 | 0.2 | 2.29 | 7.93 | 14 | 1015 | 3188 | -- | -- |
| 170.9 | 0.609 | 3.05 | 0.202 | 0.0166 | 0.705 | 0.285 | -- | 7.97 | 13.4 | 1014 | 4134 | -- | -- |
| 168.23 | 0.604 | 3.07 | 0.1 | 0.0365 | 1.34 | -- | 2.54 | 7.93 | 16.5 | 1015 | 3188 | -- | -- |
| 171.27 | 0.61 | 3.05 | 0.215 | 0.0157 | 0.703 | -- | -- | 7.97 | 13.7 | 1014 | 4139 | -- | -- |
| 168.3 | 0.604 | 3.07 | 0.102 | -- | 1.41 | -- | 2.69 | 7.93 | -- | 1015 | 3171 | -- | -- |
| 179.31 | 0.628 | 3.07 | 0.161 | 0.0436 | -- | 0.236 | -- | 7.9 | 14.8 | -- | -- | -- | -- |
| 179.48 | 0.627 | 3.07 | 0.166 | 0.0498 | -- | -- | -- | 7.9 | 16.3 | -- | -- | -- | -- |
| 171.29 | 0.61 | 3.05 | 0.22 | -- | 0.708 | -- | -- | 7.97 | -- | 1014 | 4141 | -- | -- |
| 172.51 | 0.612 | 3.06 | -- | 0.0178 | 0.673 | -- | -- | 7.94 | 16.2 | 1014 | 4124 | -- | -- |
| 179.61 | 0.626 | 3.07 | 0.164 | -- | -- | -- | -- | 7.9 | -- | -- | -- | -- | -- |
| 180.21 | 0.628 | 3.07 | -- | 0.0467 | -- | -- | -- | 7.88 | 16.4 | -- | -- | -- | -- |
| 172.53 | 0.612 | 3.06 | -- | -- | 0.677 | -- | -- | 7.94 | -- | 1014 | 4123 | -- | -- |
| 180.33 | 0.627 | 3.07 | -- | -- | -- | -- | -- | 7.88 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 165.37 | wind | 5.0 | 90 | > th | dose independent | rect. | 24 | 10 |
| 2 | 165.60 | wind | 5.0 | 90 | > th | dose dependent | rect. | 24 | 9 |
| 4 | 165.97 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 8 | 166.53 | wind | 3.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 17 | 167.26 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 18 | 167.26 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 54 | 167.76 | wind | 3.0 | 10 | > th | dose dependent | rect. | 1 | 6 |
| 58 | 167.84 | wind | 3.0 | 10 | > th | dose independent | rect. | 1 | 1 |
| 60 | 167.86 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 64 | 168.17 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 2 |
| 65 | 168.20 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 73 | 168.53 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 76 | 168.55 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 2 | 4 |
| 79 | 168.61 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 88 | 168.70 | wind | 1.0 | 90 | > th | dose dependent | rect. | 24 | 1 |
| 99 | 168.84 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 3 | 3 |
| 103 | 168.88 | wind | 5.0 | 90 | > th | dose dependent | rect. | 19 | 15 |
| 104 | 168.90 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 108 | 168.94 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 112 | 168.95 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 17 | 1 |
| 126 | 169.04 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 14 | 5 |
| 130 | 169.08 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 132 | 169.08 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 5 |
| 142 | 169.12 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 5 |
| 146 | 169.14 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 249 | 169.41 | wind | 3.0 | 10 | > th | dose dependent | rect. | 1 | 2 |
| 265 | 169.46 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 305 | 169.54 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 329 | 169.61 | wind | 3.0 | 90 | > th | dose dependent | rect. | 24 | 3 |
| 341 | 169.64 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 16 | 17 |
| 343 | 169.64 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 15 | 1 |
| 347 | 169.65 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 8 | NA |
| 358 | 169.66 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 366 | 169.67 | wind | 7.0 | 90 | > th | dose independent | rect. | 7 | 2 |
| 380 | 169.69 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 8 | NA |
| 412 | 169.72 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 17 | 15 |
| 421 | 169.73 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 16 | 18 |
| 423 | 169.73 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 2 |
| 445 | 169.75 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 15 |
| 473 | 169.78 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 8 | NA |
| 484 | 169.79 | wind | 7.0 | 90 | > th | dose dependent | rect. | 7 | 2 |
| 561 | 169.87 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 564 | 169.87 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 21 | 14 |
| 581 | 169.88 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 617 | 169.93 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 23 | 12 |
| 619 | 169.93 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 23 | 19 |
| 657 | 169.97 | wind | 1.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 731 | 170.01 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 734 | 170.01 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 12 | 14 |
| 747 | 170.02 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 23 | 19 |
| 810 | 170.06 | wind | 1.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 863 | 170.09 | atmosphere | 1015.0 | 4320 | > th | dose independent | no | NA | NA |
| 897 | 170.11 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 22 | 1 |
| 909 | 170.11 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 9 | 23 |
| 914 | 170.11 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 22 | 1 |
| 964 | 170.16 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 7 | 23 |
| 995 | 170.19 | atmosphere | 1015.0 | 4320 | < th | dose independent | no | NA | NA |