Os11g0235400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0235400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.74 | 0.49 | 4.59 | -0.902 | 0.809 | -1.55 | -0.463 | 0.706 | 0.901 | 7.78 | 22.49 | 1990 | -- | -- |
| 108.81 | 0.486 | 4.57 | -0.717 | 0.804 | -1.62 | -0.372 | -- | 0.969 | 7.7 | 22.2 | 1952 | -- | -- |
| 108.87 | 0.486 | 4.59 | -0.924 | 0.828 | -1.55 | -- | 0.739 | 0.931 | 7.63 | 22.3 | 1968 | -- | -- |
| 109.22 | 0.487 | 4.57 | -0.725 | 0.807 | -1.62 | -- | -- | 0.972 | 7.72 | 22.2 | 1952 | -- | -- |
| 136.46 | 0.544 | 4.59 | -0.798 | -- | -1.63 | -- | 0.386 | 0.983 | -- | 22.02 | 1530 | -- | -- |
| 202.72 | 0.667 | 4.45 | -0.0544 | 0.74 | -- | -0.431 | -- | 1.52 | 7.48 | -- | -- | -- | -- |
| 203.24 | 0.668 | 4.44 | -0.0644 | 0.74 | -- | -- | -- | 1.52 | 7.49 | -- | -- | -- | -- |
| 136.78 | 0.545 | 4.58 | -0.675 | -- | -1.65 | -- | -- | 1 | -- | 22.03 | 1526 | -- | -- |
| 119.8 | 0.51 | 4.54 | -- | 0.719 | -1.43 | -- | -- | 1.11 | 7.67 | 22.3 | 1548 | -- | -- |
| 232.5 | 0.712 | 4.46 | -0.0531 | -- | -- | -- | -- | 1.54 | -- | -- | -- | -- | -- |
| 203.34 | 0.667 | 4.44 | -- | 0.739 | -- | -- | -- | 1.53 | 7.5 | -- | -- | -- | -- |
| 147.24 | 0.565 | 4.56 | -- | -- | -1.44 | -- | -- | 1.11 | -- | 22.26 | 1516 | -- | -- |
| 232.57 | 0.712 | 4.46 | -- | -- | -- | -- | -- | 1.54 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.04 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 20 |
| 8 | 108.44 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 35 | 109.34 | temperature | 10 | 720 | > th | dose dependent | sin | 11 | NA |
| 43 | 109.61 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 69 | 110.19 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 77 | 110.46 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 23 |
| 85 | 110.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 92 | 110.80 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 100 | 110.93 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 125 | 111.32 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 156 | 111.52 | temperature | 15 | 1440 | > th | dose dependent | sin | 13 | NA |
| 279 | 112.17 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 3 |
| 297 | 112.28 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 3 |
| 298 | 112.28 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 5 |
| 371 | 112.56 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 5 |