Os11g0235200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : TGF-beta receptor, type I/II extracellular region family protein.
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Os11g0235200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : TGF-beta receptor, type I/II extracellular region family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.9 | 0.45 | 10 | -0.0828 | 1.1 | -1.44 | 1.04 | -2.5 | 0.0807 | 5.71 | 23.52 | 5143 | -- | -- |
| 94.08 | 0.452 | 10.1 | -0.382 | 1.11 | -0.9 | 1.01 | -- | 0.0255 | 5.72 | 35.65 | 6546 | -- | -- |
| 94.43 | 0.453 | 10 | -0.0981 | 1.09 | -1.4 | -- | -2.35 | 0.0677 | 5.69 | 23.94 | 5654 | -- | -- |
| 96.55 | 0.458 | 10.1 | -0.377 | 1.11 | -0.904 | -- | -- | 0.019 | 5.75 | 34.33 | 6541 | -- | -- |
| 155.67 | 0.581 | 10 | -0.0798 | -- | -1.47 | -- | -2.44 | 0.0761 | -- | 24.46 | 5620 | -- | -- |
| 107.49 | 0.486 | 10 | 0.0621 | 1.11 | -- | 1.03 | -- | 0.24 | 5.57 | -- | -- | -- | -- |
| 110.09 | 0.491 | 10 | 0.0666 | 1.11 | -- | -- | -- | 0.236 | 5.6 | -- | -- | -- | -- |
| 157.92 | 0.585 | 10.1 | -0.39 | -- | -0.971 | -- | -- | 0.0108 | -- | 34.9 | 7054 | -- | -- |
| 99.25 | 0.464 | 10.1 | -- | 1.11 | -0.692 | -- | -- | 0.1 | 5.72 | 37.8 | 6526 | -- | -- |
| 174.39 | 0.617 | 10.1 | 0.103 | -- | -- | -- | -- | 0.262 | -- | -- | -- | -- | -- |
| 110.21 | 0.491 | 10 | -- | 1.11 | -- | -- | -- | 0.228 | 5.59 | -- | -- | -- | -- |
| 158.98 | 0.587 | 10.1 | -- | -- | -0.791 | -- | -- | 0.123 | -- | 56.93 | 2751 | -- | -- |
| 174.67 | 0.617 | 10.1 | -- | -- | -- | -- | -- | 0.251 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.63 | temperature | 25 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 3 | 89.65 | temperature | 15 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 24 | 89.68 | temperature | 20 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 35 | 89.70 | temperature | 20 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 36 | 89.70 | temperature | 20 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 57 | 89.72 | temperature | 25 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 80 | 89.74 | temperature | 25 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 89 | 89.74 | temperature | 15 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 93 | 89.75 | temperature | 25 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 114 | 89.76 | temperature | 30 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 131 | 89.76 | temperature | 30 | 43200 | < th | dose dependent | rect. | 20 | 11 |
| 133 | 89.76 | temperature | 30 | 43200 | < th | dose dependent | rect. | 18 | 12 |
| 182 | 89.78 | temperature | 25 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 265 | 89.80 | temperature | 25 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 301 | 89.81 | temperature | 15 | 43200 | > th | dose dependent | sin | 10 | NA |
| 391 | 89.83 | temperature | 25 | 43200 | < th | dose dependent | sin | 9 | NA |
| 898 | 89.95 | temperature | 25 | 43200 | < th | dose independent | sin | 17 | NA |
| 984 | 89.97 | temperature | 25 | 43200 | < th | dose independent | rect. | 20 | 1 |