Os11g0233800 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0233800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Receptor-like protein kinase 1.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	4.37	(0.0574)	R²	:	0.0658
β₁	:	--	(--)	R²_dD	:	--	R²_D	:	--
β₂	:	--	(--)	R²_dC	:	--	R²_C	:	--
β₃	:	1.04	(0.194)	R²_dE	:	0.0606	R²_E	:	0.0397
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	0.373	(0.123)	R²_dN8	:	0.026	R²_N8	:	0.00515
σ	:	1.07
deviance	:	529.82
__

_____

C
peak time of C	:	--
E
wheather	:	humidity
threshold	:	73
memory length	:	918
response mode	:	< th
dose dependency	:	dose dependent
G
type of G	:	sin
peak or start time of G	:	5.58
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
499.64	1.05	4.33	0.444	0.438	0.922	1.89	3.83	0.41	14.3	78.83	901	5.48	--
512.84	1.05	4.35	0.219	0.439	1.19	1.45	--	0.424	14	77.6	928	6.06	--
510.84	1.05	4.32	0.424	0.482	1.01	--	2.65	0.44	14.6	78.42	910	5.42	--
516.06	1.06	4.36	0.207	0.553	1.18	--	--	0.418	14.4	78.12	931	6.4	--
517.55	1.06	4.32	0.456	--	0.67	--	3.81	0.377	--	78.18	829	4.64	--
554.14	1.1	4.4	0.318	0.184	--	1.08	--	0.27	15.4	--	--	--	--
557.61	1.11	4.4	0.338	0.203	--	--	--	0.277	16.5	--	--	--	--
529.38	1.07	4.35	0.16	--	1.11	--	--	0.423	--	72.94	847	5.56	--
517.16	1.06	4.36	--	0.548	1.2	--	--	0.395	14.4	78.02	929	6.39	--
559.8	1.11	4.39	0.33	--	--	--	--	0.271	--	--	--	--	--
560.61	1.11	4.4	--	0.196	--	--	--	0.239	16.5	--	--	--	--
529.82	1.07	4.37	--	--	1.04	--	--	0.373	--	73	918	5.58	--
562.67	1.11	4.4	--	--	--	--	--	0.235	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	490.31	humidity	70	720	> th	dose independent	rect.	18	9
2	490.55	humidity	70	720	> th	dose independent	rect.	18	3
8	495.09	humidity	60	720	> th	dose dependent	rect.	19	2
15	496.94	humidity	80	720	< th	dose dependent	rect.	17	16
25	498.27	humidity	70	720	> th	dose independent	rect.	17	13
27	498.62	temperature	30	720	< th	dose independent	rect.	18	9
30	499.43	humidity	70	720	< th	dose independent	rect.	17	16
32	499.72	humidity	80	720	< th	dose dependent	rect.	20	1
38	500.13	humidity	90	720	< th	dose dependent	rect.	17	7
39	500.15	humidity	70	720	< th	dose independent	rect.	19	13
61	501.43	humidity	70	720	< th	dose independent	rect.	17	3
83	502.59	temperature	30	720	> th	dose dependent	rect.	18	1
103	502.74	humidity	90	720	< th	dose dependent	rect.	20	3
107	503.05	humidity	80	720	< th	dose independent	rect.	20	1
178	505.60	temperature	25	720	> th	dose dependent	rect.	21	1
189	505.98	humidity	50	720	> th	dose dependent	rect.	17	9
199	506.22	temperature	30	720	< th	dose independent	rect.	17	4
224	506.85	humidity	50	1440	> th	dose independent	rect.	16	1
241	507.57	humidity	70	720	> th	dose independent	sin	12	NA
249	507.79	humidity	70	720	< th	dose independent	sin	12	NA
279	508.26	humidity	80	720	< th	dose dependent	sin	11	NA
295	508.41	temperature	30	720	< th	dose independent	rect.	18	1
326	508.92	humidity	50	720	> th	dose dependent	rect.	16	15
371	510.04	temperature	30	720	> th	dose independent	rect.	18	1
474	511.53	humidity	50	1440	< th	dose independent	rect.	16	1
482	511.59	temperature	30	720	< th	dose independent	rect.	17	14
498	511.96	humidity	50	1440	< th	dose dependent	rect.	16	1
512	512.44	temperature	20	90	> th	dose dependent	rect.	3	2
615	513.70	temperature	20	90	> th	dose independent	rect.	3	16
623	513.73	temperature	20	10	> th	dose independent	rect.	3	17
667	514.28	humidity	50	720	> th	dose dependent	sin	13	NA
669	514.32	temperature	20	90	> th	dose independent	rect.	3	2
844	515.81	temperature	30	720	< th	dose dependent	rect.	18	3
851	515.89	radiation	1	720	> th	dose dependent	rect.	18	11
991	517.19	radiation	1	720	< th	dose independent	rect.	17	10
996	517.22	radiation	1	720	> th	dose dependent	rect.	18	1