Os11g0230700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0230700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 310.6 | 0.828 | 3.22 | 0.0366 | 0.629 | 1.84 | -0.129 | 1.3 | -0.337 | 2.89 | 0.5 | 620 | -- | -- |
| 310.78 | 0.821 | 3.23 | 0.0245 | 0.629 | 2.19 | -0.136 | -- | -0.328 | 2.86 | 0.4228 | 619 | -- | -- |
| 310.65 | 0.821 | 3.22 | 0.0412 | 0.629 | 1.82 | -- | 1.3 | -0.336 | 2.88 | 0.4993 | 619 | -- | -- |
| 310.83 | 0.821 | 3.23 | 0.0279 | 0.633 | 2.18 | -- | -- | -0.331 | 2.86 | 0.4204 | 619 | -- | -- |
| 333.18 | 0.85 | 3.21 | 0.0596 | -- | 1.68 | -- | 2.37 | -0.32 | -- | 0.4937 | 621 | -- | -- |
| 341.7 | 0.867 | 3.24 | 0.298 | 0.688 | -- | 0.333 | -- | -0.395 | 2.58 | -- | -- | -- | -- |
| 342.09 | 0.866 | 3.24 | 0.289 | 0.69 | -- | -- | -- | -0.397 | 2.63 | -- | -- | -- | -- |
| 333.69 | 0.851 | 3.22 | 0.046 | -- | 2.37 | -- | -- | -0.312 | -- | 0.4114 | 588 | -- | -- |
| 310.85 | 0.821 | 3.23 | -- | 0.631 | 2.19 | -- | -- | -0.331 | 2.86 | 0.4174 | 619 | -- | -- |
| 369.9 | 0.899 | 3.24 | 0.319 | -- | -- | -- | -- | -0.38 | -- | -- | -- | -- | -- |
| 344.3 | 0.868 | 3.25 | -- | 0.695 | -- | -- | -- | -0.429 | 2.63 | -- | -- | -- | -- |
| 333.74 | 0.851 | 3.23 | -- | -- | 2.39 | -- | -- | -0.316 | -- | 0.4002 | 588 | -- | -- |
| 372.58 | 0.901 | 3.25 | -- | -- | -- | -- | -- | -0.415 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 298.24 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 2 |
| 5 | 300.00 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 55 | 303.97 | humidity | 90.0 | 720 | > th | dose independent | rect. | 16 | 6 |
| 88 | 305.95 | humidity | 80.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 121 | 307.50 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 14 | 15 |
| 122 | 307.50 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 14 | 15 |
| 130 | 308.07 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 153 | 309.03 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 158 | 309.29 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 9 |
| 159 | 309.29 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 9 |
| 166 | 309.47 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 168 | 309.53 | humidity | 90.0 | 720 | > th | dose independent | rect. | 13 | 10 |
| 179 | 309.64 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 14 | 8 |
| 184 | 309.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 3 |
| 185 | 309.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 5 |
| 196 | 309.83 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 20 | 22 |
| 205 | 309.89 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 224 | 310.02 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 4 | 14 |
| 275 | 310.47 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 280 | 310.49 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 17 | 2 |
| 290 | 310.66 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 10 |
| 291 | 310.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 12 |
| 320 | 310.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 7 |
| 321 | 310.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 7 |
| 328 | 310.86 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 329 | 310.86 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 17 | 11 |
| 335 | 310.88 | humidity | 90.0 | 720 | < th | dose independent | rect. | 16 | 7 |
| 357 | 310.98 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 361 | 310.99 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 11 | 11 |
| 362 | 310.99 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 10 | 13 |
| 374 | 311.03 | humidity | 80.0 | 720 | < th | dose independent | rect. | 16 | 5 |
| 382 | 311.06 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 16 | NA |
| 410 | 311.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 8 |
| 413 | 311.18 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 18 | NA |
| 438 | 311.26 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 10 |
| 447 | 311.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 12 |
| 451 | 311.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 12 |
| 498 | 311.37 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 706 | 311.93 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 6 | 23 |
| 711 | 311.93 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 725 | 311.96 | precipitation | 0.1 | 720 | > th | dose independent | sin | 14 | NA |
| 742 | 311.99 | humidity | 90.0 | 720 | > th | dose dependent | sin | 20 | NA |
| 754 | 312.02 | precipitation | 0.1 | 720 | < th | dose independent | sin | 14 | NA |
| 756 | 312.02 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 14 | NA |
| 800 | 312.13 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 831 | 312.18 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 13 |
| 841 | 312.20 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 18 | NA |
| 848 | 312.21 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 18 | NA |
| 849 | 312.21 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 18 | NA |
| 866 | 312.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 867 | 312.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 882 | 312.29 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 13 |
| 889 | 312.29 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 13 |
| 898 | 312.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 958 | 312.46 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 7 | 11 |
| 961 | 312.46 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 7 | 11 |
| 977 | 312.50 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 23 |
| 979 | 312.50 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 23 |