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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0230400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Proteinase inhibitor I4, serpin family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.2 (0.0424) R2 : 0.00199
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0849 (0.0892) R2dN8 : 0.00256 R2N8 : 0.00199
σ : 0.798
deviance : 292.02
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
277.07 0.782 2.99 2.22 0.0827 -1.59 0.235 11 -0.0624 9.61 30.1 4191 -- --
284.41 0.785 3.12 0.974 0.119 -0.695 0.856 -- 0.236 9.4 20.8 7826 -- --
277.03 0.775 2.98 2.24 0.075 -1.6 -- 11.3 -0.0438 9.59 30.1 4066 -- --
279.67 0.779 3.14 0.895 0.0855 -0.78 -- -- 0.178 8.97 19.35 6339 -- --
277.25 0.776 2.98 2.3 -- -1.66 -- 11.6 -0.0561 -- 30.17 4066 -- --
287.59 0.795 3.19 0.357 0.106 -- 0.254 -- -0.045 9.62 -- -- -- --
287.81 0.794 3.19 0.368 0.105 -- -- -- -0.044 10.3 -- -- -- --
280.1 0.779 3.15 0.874 -- -0.755 -- -- 0.156 -- 19.3 6339 -- --
288.12 0.791 3.17 -- 0.0881 -0.277 -- -- 0.0153 9.11 22.8 2603 -- --
288.49 0.794 3.19 0.366 -- -- -- -- -0.0443 -- -- -- -- --
291.37 0.798 3.2 -- 0.103 -- -- -- -0.085 10.1 -- -- -- --
288.53 0.791 3.18 -- -- -0.282 -- -- 0.0166 -- 22.82 2473 -- --
292.02 0.798 3.2 -- -- -- -- -- -0.0849 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 261.66 wind 1.0 90 < th dose dependent rect. 6 4
2 263.58 atmosphere 995.0 90 > th dose independent rect. 8 23
3 263.69 humidity 90.0 10 < th dose independent rect. 7 1
4 263.76 wind 1.0 90 < th dose dependent rect. 6 1
13 265.43 wind 1.0 90 < th dose independent rect. 6 4
14 265.45 temperature 25.0 90 < th dose dependent rect. 6 1
16 265.63 wind 1.0 90 < th dose independent rect. 6 1
19 266.75 radiation 10.0 10 > th dose independent rect. 7 1
35 266.97 wind 1.0 1440 < th dose dependent rect. 4 1
37 267.14 humidity 90.0 90 < th dose dependent rect. 3 2
38 267.16 humidity 90.0 30 < th dose independent rect. 2 2
43 267.45 wind 1.0 270 < th dose dependent rect. 4 3
83 268.32 wind 1.0 30 > th dose independent rect. 7 1
99 269.07 temperature 25.0 90 < th dose independent rect. 7 2
104 269.18 radiation 30.0 30 < th dose independent rect. 7 1
105 269.20 wind 5.0 30 < th dose independent rect. 7 1
108 269.27 precipitation 0.1 30 < th dose independent rect. 7 1
109 269.27 precipitation 0.1 30 < th dose dependent rect. 7 1
116 269.45 humidity 70.0 30 > th dose independent rect. 7 1
118 269.48 wind 9.0 1440 < th dose independent rect. 8 1
121 269.48 temperature 10.0 1440 > th dose independent rect. 8 1
126 269.48 humidity 50.0 1440 > th dose independent rect. 8 1
128 269.48 atmosphere 995.0 1440 > th dose independent rect. 8 1
131 269.48 atmosphere 1015.0 1440 < th dose independent rect. 8 1
135 269.48 temperature 10.0 1440 > th dose independent rect. 9 23
139 269.52 atmosphere 1010.0 30 < th dose independent rect. 7 1
142 269.56 wind 9.0 30 < th dose independent rect. 7 1
143 269.56 temperature 10.0 30 > th dose independent rect. 7 1
146 269.56 humidity 50.0 30 > th dose independent rect. 7 1
148 269.56 atmosphere 995.0 30 > th dose independent rect. 7 1
150 269.56 temperature 10.0 30 > th dose independent rect. 8 23
153 269.58 wind 9.0 90 < th dose dependent rect. 7 1
170 269.72 wind 9.0 10 < th dose dependent rect. 7 1
213 270.10 precipitation 0.1 10 < th dose independent rect. 8 23
214 270.10 precipitation 0.1 10 < th dose dependent rect. 8 23
217 270.14 wind 9.0 30 < th dose independent rect. 8 23
283 270.60 radiation 1.0 10 > th dose dependent rect. 7 1
310 271.13 temperature 10.0 30 > th dose dependent rect. 7 1
313 271.20 wind 5.0 30 < th dose independent rect. 18 13
318 271.35 radiation 1.0 90 > th dose independent rect. 16 17
319 271.36 wind 1.0 270 < th dose independent rect. 4 3
337 271.67 atmosphere 995.0 270 > th dose independent rect. 8 13
344 271.77 temperature 20.0 270 < th dose independent rect. 4 2
353 271.85 humidity 50.0 90 > th dose dependent rect. 7 1
379 272.08 atmosphere 1015.0 30 < th dose dependent rect. 7 1
381 272.15 atmosphere 995.0 30 > th dose dependent rect. 7 1
429 272.56 radiation 40.0 90 < th dose dependent rect. 7 1
450 272.66 precipitation 0.1 270 < th dose independent rect. 4 14
452 272.66 precipitation 0.1 270 < th dose dependent rect. 4 14
454 272.69 temperature 25.0 270 < th dose dependent rect. 4 3
455 272.71 precipitation 0.1 4320 < th dose independent rect. 22 1
456 272.71 precipitation 0.1 4320 < th dose dependent rect. 22 1
487 272.93 wind 1.0 270 > th dose independent rect. 8 13
493 272.98 wind 1.0 10 < th dose dependent rect. 8 1
499 273.03 precipitation 0.1 4320 < th dose independent rect. 21 4
500 273.03 precipitation 0.1 4320 < th dose dependent rect. 21 4
502 273.05 radiation 10.0 10 > th dose independent sin 10 NA
507 273.07 humidity 70.0 10 < th dose independent rect. 17 3
522 273.08 precipitation 0.1 4320 > th dose independent rect. 22 1
525 273.08 precipitation 0.1 4320 > th dose dependent rect. 22 1
533 273.16 precipitation 0.1 4320 > th dose independent rect. 21 4
561 273.23 wind 7.0 270 < th dose independent rect. 17 11
566 273.27 wind 9.0 270 < th dose dependent rect. 4 14
606 273.36 wind 5.0 4320 > th dose dependent rect. 23 2
608 273.36 radiation 1.0 10 > th dose dependent rect. 18 14
624 273.40 precipitation 0.1 4320 > th dose dependent rect. 21 4
633 273.51 wind 7.0 4320 > th dose independent rect. 23 3
636 273.52 wind 5.0 4320 < th dose independent rect. 22 3
639 273.54 radiation 1.0 30 > th dose independent rect. 9 22
682 273.64 atmosphere 995.0 270 > th dose independent rect. 17 11
721 273.86 wind 7.0 720 < th dose dependent rect. 6 2
733 273.95 humidity 50.0 270 > th dose dependent rect. 21 11
736 273.98 wind 7.0 4320 > th dose independent rect. 24 1
737 273.98 radiation 10.0 270 < th dose independent rect. 18 10
750 274.04 temperature 10.0 270 > th dose independent rect. 18 10
751 274.04 humidity 50.0 270 > th dose independent rect. 18 10
755 274.04 temperature 10.0 270 > th dose independent rect. 4 14
756 274.04 atmosphere 1015.0 270 < th dose independent rect. 4 14
768 274.06 radiation 40.0 270 < th dose dependent rect. 18 10
774 274.12 wind 5.0 14400 < th dose independent rect. 11 1
788 274.13 humidity 90.0 270 > th dose dependent rect. 6 1
840 274.24 humidity 50.0 4320 < th dose dependent rect. 14 2
842 274.25 temperature 20.0 270 < th dose independent rect. 3 19
850 274.27 precipitation 0.1 90 < th dose independent rect. 6 13
852 274.27 wind 1.0 270 < th dose dependent rect. 24 7
853 274.27 precipitation 0.1 90 < th dose dependent rect. 6 13
858 274.29 precipitation 0.1 270 < th dose independent rect. 18 10
859 274.29 precipitation 0.1 270 < th dose dependent rect. 18 10
874 274.33 radiation 10.0 10 < th dose independent rect. 20 11
875 274.33 wind 9.0 270 < th dose independent rect. 4 14
876 274.34 atmosphere 1015.0 30 < th dose independent rect. 8 23
880 274.36 wind 9.0 90 < th dose dependent rect. 6 13
882 274.37 wind 7.0 30 < th dose independent rect. 7 11
884 274.37 humidity 70.0 10 < th dose dependent rect. 17 3
899 274.39 atmosphere 1005.0 10 > th dose dependent rect. 3 1
902 274.40 humidity 50.0 4320 > th dose independent rect. 14 1
903 274.40 wind 9.0 10 < th dose independent rect. 7 13
904 274.40 temperature 30.0 10 < th dose independent rect. 9 22
905 274.41 humidity 90.0 10 < th dose independent rect. 4 5
945 274.61 wind 1.0 1440 < th dose independent rect. 4 1
951 274.62 radiation 10.0 90 < th dose dependent rect. 19 12
965 274.67 humidity 50.0 90 > th dose independent rect. 15 18
973 274.71 wind 9.0 90 < th dose independent rect. 6 13
988 274.83 wind 5.0 14400 > th dose independent rect. 11 1