Os11g0229100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0229100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 248.69 | 0.741 | 4.37 | -0.183 | 0.313 | 0.85 | -0.621 | -0.951 | -1.7 | 7.47 | 20 | 3555 | -- | -- |
| 249.8 | 0.736 | 4.34 | -0.0463 | 0.318 | 1.05 | -0.576 | -- | -1.67 | 7.42 | 19.8 | 3552 | -- | -- |
| 249.19 | 0.735 | 4.37 | -0.192 | 0.324 | 0.855 | -- | -0.925 | -1.7 | 8.64 | 20.1 | 3580 | -- | -- |
| 250.12 | 0.737 | 4.34 | -0.0607 | 0.326 | 1.06 | -- | -- | -1.66 | 8.67 | 19.86 | 3575 | -- | -- |
| 253.44 | 0.741 | 4.37 | -0.126 | -- | 0.83 | -- | -0.848 | -1.68 | -- | 20.12 | 2790 | -- | -- |
| 268.26 | 0.768 | 4.28 | 0.553 | 0.274 | -- | -0.959 | -- | -1.4 | 6.49 | -- | -- | -- | -- |
| 269.39 | 0.769 | 4.28 | 0.545 | 0.299 | -- | -- | -- | -1.4 | 8.3 | -- | -- | -- | -- |
| 254.71 | 0.743 | 4.34 | 0.00663 | -- | 1.01 | -- | -- | -1.64 | -- | 20 | 2805 | -- | -- |
| 249.79 | 0.736 | 4.34 | -- | 0.31 | 1 | -- | -- | -1.66 | 9.07 | 20 | 2719 | -- | -- |
| 274.35 | 0.774 | 4.29 | 0.547 | -- | -- | -- | -- | -1.39 | -- | -- | -- | -- | -- |
| 277.22 | 0.779 | 4.29 | -- | 0.302 | -- | -- | -- | -1.46 | 8.17 | -- | -- | -- | -- |
| 254.71 | 0.743 | 4.34 | -- | -- | 1 | -- | -- | -1.64 | -- | 19.98 | 2808 | -- | -- |
| 282.24 | 0.784 | 4.3 | -- | -- | -- | -- | -- | -1.45 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 247.07 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 2 | 247.11 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 3 | 247.30 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 4 | 247.35 | temperature | 20 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 5 | 247.38 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 3 |
| 6 | 247.41 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 9 | 247.45 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 3 |
| 11 | 247.48 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 6 |
| 13 | 247.50 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 6 |
| 30 | 247.67 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 77 | 248.10 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 89 | 248.22 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 103 | 248.36 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 9 |
| 108 | 248.40 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 116 | 248.47 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 127 | 248.51 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 9 |
| 128 | 248.52 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 129 | 248.52 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 299 | 249.01 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 16 |
| 357 | 249.09 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 368 | 249.10 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 493 | 249.30 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 9 |
| 535 | 249.37 | temperature | 20 | 4320 | > th | dose independent | rect. | 7 | 21 |
| 564 | 249.40 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 22 |
| 683 | 249.54 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 723 | 249.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 864 | 249.72 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 893 | 249.75 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 898 | 249.75 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 958 | 249.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 980 | 249.82 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 984 | 249.82 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 3 |