Os11g0229000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0229000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 102.74 | 0.476 | 10.5 | 0.301 | 0.669 | -0.832 | 0.112 | 5.4 | -7.29 | 18 | 26.1 | 533 | -- | -- |
| 105.91 | 0.479 | 10.5 | -0.392 | 0.466 | -0.31 | 0.409 | -- | -7.42 | 18 | 25.3 | 3037 | -- | -- |
| 102.76 | 0.472 | 10.5 | 0.318 | 0.67 | -0.839 | -- | 5.54 | -7.29 | 18 | 26.1 | 538 | -- | -- |
| 105.81 | 0.479 | 10.6 | -0.321 | 0.446 | -0.324 | -- | -- | -7.45 | 18.2 | 26.6 | 2809 | -- | -- |
| 117.05 | 0.504 | 10.5 | 0.0418 | -- | -0.271 | -- | 5.44 | -7.37 | -- | 27.78 | 531 | -- | -- |
| 109.27 | 0.49 | 10.6 | -0.416 | 0.443 | -- | 0.688 | -- | -7.45 | 18.4 | -- | -- | -- | -- |
| 110.27 | 0.492 | 10.6 | -0.423 | 0.45 | -- | -- | -- | -7.45 | 17.9 | -- | -- | -- | -- |
| 115.74 | 0.501 | 10.6 | -0.32 | -- | -0.337 | -- | -- | -7.45 | -- | 26.4 | 2825 | -- | -- |
| 108.28 | 0.485 | 10.6 | -- | 0.444 | -0.394 | -- | -- | -7.43 | 18.2 | 26.59 | 2862 | -- | -- |
| 120.78 | 0.514 | 10.6 | -0.436 | -- | -- | -- | -- | -7.46 | -- | -- | -- | -- | -- |
| 114.98 | 0.502 | 10.6 | -- | 0.457 | -- | -- | -- | -7.4 | 17.9 | -- | -- | -- | -- |
| 118.26 | 0.506 | 10.6 | -- | -- | -0.404 | -- | -- | -7.41 | -- | 26.1 | 2836 | -- | -- |
| 125.8 | 0.524 | 10.6 | -- | -- | -- | -- | -- | -7.41 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.72 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 5 |
| 7 | 99.21 | temperature | 25.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 8 | 99.24 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 9 | 99.29 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 2 |
| 10 | 99.30 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 41 | 100.30 | temperature | 25.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 44 | 100.37 | temperature | 25.0 | 720 | < th | dose independent | rect. | 20 | 6 |
| 53 | 100.51 | temperature | 30.0 | 720 | > th | dose independent | rect. | 13 | 1 |
| 60 | 100.62 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 7 | 8 |
| 61 | 100.63 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 81 | 100.97 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 7 |
| 82 | 100.97 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 105 | 101.19 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 114 | 101.26 | temperature | 25.0 | 720 | < th | dose independent | rect. | 8 | 5 |
| 128 | 101.35 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 19 | 8 |
| 134 | 101.42 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 135 | 101.43 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 6 |
| 141 | 101.46 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 6 | 21 |
| 150 | 101.52 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 157 | 101.57 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 187 | 101.71 | temperature | 25.0 | 720 | > th | dose dependent | sin | 4 | NA |
| 197 | 101.76 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 221 | 101.91 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 233 | 102.01 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 251 | 102.11 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 253 | 102.12 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 280 | 102.12 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 308 | 102.13 | temperature | 25.0 | 720 | > th | dose independent | rect. | 19 | 10 |
| 316 | 102.17 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 317 | 102.17 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 6 | 21 |
| 318 | 102.18 | humidity | 70.0 | 720 | > th | dose independent | rect. | 10 | 1 |
| 325 | 102.19 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 19 |
| 342 | 102.24 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 12 | 15 |
| 352 | 102.28 | wind | 1.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 353 | 102.28 | temperature | 25.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 385 | 102.40 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 409 | 102.49 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 411 | 102.49 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 9 | 5 |
| 412 | 102.50 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 413 | 102.50 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 419 | 102.51 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 438 | 102.54 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 439 | 102.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 442 | 102.54 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 446 | 102.54 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 455 | 102.54 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 456 | 102.54 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 476 | 102.54 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 477 | 102.54 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 6 |
| 480 | 102.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 517 | 102.57 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 12 |
| 521 | 102.60 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 541 | 102.64 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 543 | 102.64 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 556 | 102.64 | wind | 9.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 560 | 102.65 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 573 | 102.68 | temperature | 20.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 576 | 102.69 | radiation | 30.0 | 720 | > th | dose independent | rect. | 14 | 1 |
| 577 | 102.69 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 587 | 102.71 | wind | 3.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 591 | 102.72 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 593 | 102.72 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 14 |
| 597 | 102.74 | humidity | 70.0 | 720 | > th | dose independent | rect. | 4 | 16 |
| 606 | 102.76 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 8 |
| 609 | 102.76 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 8 |
| 652 | 102.83 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 11 |
| 653 | 102.83 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 659 | 102.84 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 666 | 102.85 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 672 | 102.86 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 677 | 102.86 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 681 | 102.88 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 684 | 102.88 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 693 | 102.90 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 694 | 102.90 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 697 | 102.90 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 700 | 102.90 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 701 | 102.90 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 703 | 102.90 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 721 | 102.90 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 722 | 102.90 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 752 | 102.93 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 754 | 102.93 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 9 |
| 760 | 102.94 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 763 | 102.95 | humidity | 70.0 | 720 | > th | dose independent | sin | 10 | NA |
| 768 | 102.95 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 10 | 17 |
| 770 | 102.96 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 775 | 102.96 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 21 |
| 776 | 102.96 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 779 | 102.96 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 6 |
| 783 | 102.97 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 6 | 8 |
| 786 | 102.98 | humidity | 70.0 | 720 | > th | dose independent | rect. | 2 | 19 |
| 797 | 103.00 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 799 | 103.00 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 7 |
| 812 | 103.03 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 832 | 103.04 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 4 | 10 |
| 834 | 103.05 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 841 | 103.06 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 844 | 103.06 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 856 | 103.08 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 7 | 8 |
| 874 | 103.09 | temperature | 10.0 | 720 | > th | dose independent | rect. | 7 | 8 |
| 876 | 103.09 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 7 | 8 |
| 883 | 103.09 | temperature | 10.0 | 720 | > th | dose independent | rect. | 15 | 16 |
| 888 | 103.10 | humidity | 70.0 | 720 | > th | dose independent | rect. | 13 | 23 |
| 889 | 103.10 | atmosphere | 1015.0 | 720 | < th | dose dependent | rect. | 3 | 1 |
| 900 | 103.12 | radiation | 40.0 | 720 | > th | dose independent | rect. | 12 | 2 |
| 904 | 103.12 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 919 | 103.13 | temperature | 25.0 | 270 | < th | dose independent | rect. | 21 | 12 |
| 942 | 103.14 | humidity | 70.0 | 720 | > th | dose independent | rect. | 4 | 23 |
| 979 | 103.17 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 989 | 103.18 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 22 |
| 996 | 103.19 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |