Os11g0227600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0227600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 174.6 | 0.621 | 3.47 | -0.157 | 0.0184 | -0.111 | -1.28 | 2.48 | -0.349 | 7.49 | 70.08 | 732 | -- | -- |
| 179.22 | 0.624 | 3.46 | -0.0325 | 0.0411 | -0.191 | -0.673 | -- | -0.341 | 7.44 | 84.01 | 256 | -- | -- |
| 174.95 | 0.616 | 3.47 | -0.262 | 0.00536 | -0.0743 | -- | 2.04 | -0.374 | 19.4 | 69.99 | 2686 | -- | -- |
| 178.68 | 0.623 | 3.44 | 0.0281 | 0.108 | -0.182 | -- | -- | -0.313 | 7.19 | 84 | 261 | -- | -- |
| 174.87 | 0.616 | 3.47 | -0.234 | -- | -0.0549 | -- | 2.03 | -0.353 | -- | 69.93 | 2634 | -- | -- |
| 180.57 | 0.63 | 3.44 | 0.00753 | 0.00911 | -- | 0.355 | -- | -0.296 | 18.7 | -- | -- | -- | -- |
| 180.88 | 0.63 | 3.44 | 0.00212 | 0.0112 | -- | -- | -- | -0.295 | 17.4 | -- | -- | -- | -- |
| 179.13 | 0.623 | 3.44 | 0.0252 | -- | -0.144 | -- | -- | -0.301 | -- | 84.38 | 256 | -- | -- |
| 177.85 | 0.621 | 3.43 | -- | 0.187 | -0.246 | -- | -- | -0.307 | 4.41 | 85 | 256 | -- | -- |
| 180.89 | 0.628 | 3.44 | 0.00174 | -- | -- | -- | -- | -0.295 | -- | -- | -- | -- | -- |
| 180.88 | 0.629 | 3.44 | -- | 0.0111 | -- | -- | -- | -0.295 | 17.4 | -- | -- | -- | -- |
| 179.14 | 0.623 | 3.44 | -- | -- | -0.143 | -- | -- | -0.303 | -- | 84.34 | 256 | -- | -- |
| 180.89 | 0.628 | 3.44 | -- | -- | -- | -- | -- | -0.295 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.02 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 3 |
| 3 | 170.71 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 5 | 170.73 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 6 | 170.86 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 3 |
| 12 | 171.18 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 8 | 2 |
| 13 | 171.21 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 16 | 171.24 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 9 | 15 |
| 25 | 171.42 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 28 | 171.52 | humidity | 80.0 | 270 | < th | dose independent | rect. | 20 | 14 |
| 36 | 171.69 | humidity | 80.0 | 270 | < th | dose independent | sin | 8 | NA |
| 37 | 171.77 | temperature | 15.0 | 10 | > th | dose independent | rect. | 9 | 15 |
| 55 | 172.00 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 19 | 15 |
| 81 | 172.38 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 6 |
| 84 | 172.41 | wind | 3.0 | 10 | < th | dose independent | rect. | 24 | 9 |
| 86 | 172.44 | humidity | 80.0 | 270 | > th | dose independent | sin | 8 | NA |
| 101 | 172.55 | wind | 9.0 | 10 | < th | dose dependent | rect. | 24 | 9 |
| 103 | 172.56 | wind | 1.0 | 90 | > th | dose dependent | rect. | 22 | 1 |
| 112 | 172.65 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 21 | 20 |
| 113 | 172.65 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 144 | 172.83 | wind | 1.0 | 90 | > th | dose dependent | rect. | 21 | 3 |
| 177 | 173.00 | wind | 3.0 | 90 | > th | dose independent | rect. | 21 | 3 |
| 181 | 173.01 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 15 |
| 183 | 173.01 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 188 | 173.03 | radiation | 10.0 | 270 | < th | dose independent | rect. | 23 | 19 |
| 196 | 173.05 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 24 | 12 |
| 204 | 173.07 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 207 | 173.07 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 21 | 15 |
| 216 | 173.09 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 218 | 173.10 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 219 | 173.10 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 10 | 14 |
| 224 | 173.11 | humidity | 90.0 | 10 | < th | dose independent | rect. | 22 | 1 |
| 230 | 173.12 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 24 | 9 |
| 232 | 173.12 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 233 | 173.12 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 24 | 9 |
| 234 | 173.13 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 237 | 173.13 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 238 | 173.13 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 24 | 9 |
| 248 | 173.16 | wind | 7.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 250 | 173.16 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 252 | 173.16 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 253 | 173.16 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 257 | 173.16 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 259 | 173.16 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 265 | 173.16 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 266 | 173.16 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 274 | 173.17 | wind | 9.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 286 | 173.21 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 289 | 173.22 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 293 | 173.23 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 14 |
| 308 | 173.27 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 319 | 173.32 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 320 | 173.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 323 | 173.32 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 327 | 173.32 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 338 | 173.32 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 339 | 173.32 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 359 | 173.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 362 | 173.32 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 368 | 173.33 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 15 |
| 375 | 173.33 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 15 |
| 385 | 173.36 | temperature | 10.0 | 10 | > th | dose independent | rect. | 24 | 9 |
| 386 | 173.36 | temperature | 30.0 | 10 | < th | dose independent | rect. | 24 | 9 |
| 387 | 173.36 | humidity | 50.0 | 10 | > th | dose independent | rect. | 24 | 9 |
| 389 | 173.36 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 24 | 9 |
| 390 | 173.36 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 24 | 9 |
| 391 | 173.36 | radiation | 40.0 | 90 | < th | dose independent | rect. | 24 | 9 |
| 399 | 173.37 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 401 | 173.38 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 21 | 17 |
| 407 | 173.39 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 8 | 9 |
| 429 | 173.45 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 9 |
| 432 | 173.45 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 9 |
| 435 | 173.45 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 15 |
| 444 | 173.48 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 15 |
| 446 | 173.48 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 20 |
| 455 | 173.51 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 10 |
| 465 | 173.53 | humidity | 80.0 | 270 | < th | dose independent | rect. | 2 | 8 |
| 472 | 173.53 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 23 | 19 |
| 501 | 173.59 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 23 | 23 |
| 504 | 173.59 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 508 | 173.60 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 526 | 173.61 | radiation | 20.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 535 | 173.62 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 568 | 173.67 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 8 | 2 |
| 573 | 173.68 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 15 |
| 584 | 173.70 | humidity | 90.0 | 10 | < th | dose independent | rect. | 21 | 3 |
| 603 | 173.73 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 604 | 173.73 | wind | 5.0 | 90 | > th | dose dependent | rect. | 22 | 1 |
| 610 | 173.74 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 3 | 21 |
| 614 | 173.75 | wind | 3.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 622 | 173.75 | humidity | 90.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 631 | 173.77 | humidity | 70.0 | 1440 | > th | dose independent | sin | 7 | NA |
| 635 | 173.77 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 655 | 173.79 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 15 |
| 670 | 173.81 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 1 | 9 |
| 678 | 173.81 | wind | 9.0 | 30 | < th | dose dependent | rect. | 17 | 16 |
| 729 | 173.90 | humidity | 80.0 | 270 | < th | dose independent | rect. | 7 | 3 |
| 732 | 173.90 | wind | 7.0 | 10 | < th | dose dependent | rect. | 15 | 18 |
| 776 | 173.96 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 8 |
| 785 | 173.97 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 810 | 174.01 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 4 |
| 814 | 174.01 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 844 | 174.06 | wind | 3.0 | 10 | > th | dose independent | rect. | 21 | 10 |
| 851 | 174.07 | radiation | 40.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 865 | 174.08 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 15 |
| 873 | 174.09 | humidity | 70.0 | 1440 | < th | dose independent | sin | 6 | NA |
| 891 | 174.11 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 925 | 174.14 | humidity | 70.0 | 720 | > th | dose independent | rect. | 4 | 18 |
| 972 | 174.20 | wind | 1.0 | 10 | > th | dose dependent | rect. | 22 | 8 |
| 982 | 174.21 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 22 | 3 |