Os11g0227300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0227300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.76 | 0.559 | 6.56 | 1.84 | 0.454 | -1.07 | 0.497 | -0.291 | -3.65 | 5.02 | 49.93 | 1408 | -- | -- |
| 141.8 | 0.555 | 6.56 | 1.86 | 0.456 | -1.14 | 0.491 | -- | -3.65 | 5.02 | 49.91 | 1400 | -- | -- |
| 142.39 | 0.556 | 6.56 | 1.84 | 0.457 | -1.06 | -- | -0.257 | -3.65 | 5.01 | 49.95 | 1412 | -- | -- |
| 142.35 | 0.556 | 6.56 | 1.85 | 0.464 | -1.16 | -- | -- | -3.65 | 4.94 | 49.97 | 1225 | -- | -- |
| 153.19 | 0.576 | 6.57 | 1.83 | -- | -0.927 | -- | -0.506 | -3.63 | -- | 49.3 | 1469 | -- | -- |
| 157.2 | 0.588 | 6.54 | 1.61 | 0.423 | -- | 0.417 | -- | -3.57 | 5.66 | -- | -- | -- | -- |
| 157.62 | 0.588 | 6.54 | 1.62 | 0.425 | -- | -- | -- | -3.57 | 5.57 | -- | -- | -- | -- |
| 153.31 | 0.577 | 6.57 | 1.85 | -- | -1.06 | -- | -- | -3.64 | -- | 49.39 | 1460 | -- | -- |
| 226.07 | 0.704 | 6.58 | -- | 0.462 | 0.197 | -- | -- | -3.75 | 5.37 | 49.97 | 1225 | -- | -- |
| 167.03 | 0.604 | 6.55 | 1.63 | -- | -- | -- | -- | -3.56 | -- | -- | -- | -- | -- |
| 226.36 | 0.704 | 6.58 | -- | 0.452 | -- | -- | -- | -3.75 | 5.42 | -- | -- | -- | -- |
| 227.03 | 0.702 | 6.6 | -- | -- | -0.577 | -- | -- | -3.8 | -- | 66 | 429 | -- | -- |
| 237.01 | 0.719 | 6.59 | -- | -- | -- | -- | -- | -3.75 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.39 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 2 | 132.39 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 3 | 133.11 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 4 | 134.61 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 5 | 135.50 | wind | 1 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 8 | 135.75 | temperature | 15 | 270 | > th | dose independent | rect. | 18 | 9 |
| 9 | 136.17 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 11 | 136.30 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 14 | 136.56 | temperature | 15 | 270 | > th | dose independent | rect. | 5 | 22 |
| 20 | 137.10 | wind | 1 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 21 | 137.10 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 22 | 137.25 | temperature | 15 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 23 | 137.29 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 24 | 137.34 | temperature | 15 | 1440 | > th | dose independent | rect. | 10 | 7 |
| 27 | 137.55 | radiation | 30 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 28 | 137.63 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 29 | 137.65 | wind | 1 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 31 | 137.73 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 49 | 138.05 | temperature | 15 | 30 | > th | dose independent | rect. | 9 | 18 |
| 52 | 138.08 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 57 | 138.17 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 74 | 138.24 | humidity | 80 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 79 | 138.31 | humidity | 80 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 88 | 138.40 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 89 | 138.40 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 93 | 138.43 | temperature | 30 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 95 | 138.46 | temperature | 30 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 98 | 138.49 | humidity | 80 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 102 | 138.51 | humidity | 50 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 114 | 138.62 | temperature | 15 | 1440 | > th | dose independent | rect. | 14 | 7 |
| 119 | 138.63 | temperature | 30 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 139 | 138.85 | radiation | 10 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 143 | 138.88 | temperature | 10 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 144 | 138.89 | radiation | 20 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 145 | 138.89 | radiation | 40 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 149 | 138.91 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 169 | 139.05 | radiation | 20 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 182 | 139.17 | radiation | 40 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 213 | 139.30 | humidity | 50 | 270 | > th | dose independent | rect. | 5 | 22 |
| 214 | 139.31 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 6 |
| 215 | 139.32 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 242 | 139.36 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 246 | 139.38 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 6 |
| 315 | 139.52 | humidity | 50 | 1440 | < th | dose independent | sin | 14 | NA |
| 338 | 139.54 | radiation | 40 | 43200 | > th | dose independent | sin | 0 | NA |
| 358 | 139.59 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 379 | 139.61 | humidity | 50 | 1440 | > th | dose independent | sin | 14 | NA |
| 400 | 139.64 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |
| 530 | 139.69 | humidity | 50 | 1440 | < th | dose independent | rect. | 14 | 4 |
| 588 | 139.82 | radiation | 20 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 595 | 139.84 | wind | 3 | 43200 | < th | dose dependent | rect. | 6 | 9 |
| 599 | 139.86 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 11 |
| 623 | 139.88 | humidity | 50 | 1440 | > th | dose independent | rect. | 14 | 11 |
| 651 | 139.89 | humidity | 50 | 1440 | > th | dose independent | rect. | 14 | 14 |
| 679 | 139.92 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 11 |
| 688 | 139.93 | atmosphere | 1010 | 90 | < th | dose independent | rect. | 19 | 8 |
| 705 | 139.94 | humidity | 50 | 1440 | > th | dose independent | rect. | 14 | 9 |
| 713 | 139.95 | humidity | 50 | 1440 | > th | dose independent | rect. | 14 | 4 |
| 765 | 140.02 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 800 | 140.05 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 18 |
| 878 | 140.17 | wind | 1 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 912 | 140.21 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 5 |
| 916 | 140.23 | wind | 1 | 14400 | > th | dose dependent | rect. | 3 | 13 |
| 969 | 140.30 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 11 | 1 |