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Os11g0227000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0268) R2 : 0.701
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.97 (0.0698) R2dC : 0.529 R2C : 0.576
β3 : -1.34 (0.104) R2dE : 0.118 R2E : 0.173
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0886 (0.0574) R2dN8 : 0.00196 R2N8 : 0.00426
σ : 0.502
deviance : 115.98
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_____
C
peak time of C : 16.9
E
wheather : humidity
threshold : 72
memory length : 1114
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
111.17 0.495 10.6 -0.229 1.98 -1.47 -0.295 1.49 0.0346 16.9 70.53 1081 -- --
113.07 0.495 10.6 -0.32 1.97 -1.27 -0.434 -- 0.0588 16.8 71.78 1119 -- --
111.38 0.492 10.6 -0.223 1.98 -1.48 -- 1.52 0.0456 16.9 71.18 1080 -- --
113.48 0.496 10.6 -0.319 1.97 -1.29 -- -- 0.061 16.9 72 1110 -- --
307.65 0.817 10.5 -0.187 -- -1.77 -- 1.59 0.0808 -- 79.19 1202 -- --
147.2 0.569 10.6 -0.54 2.06 -- -0.522 -- 0.183 16.4 -- -- -- --
147.93 0.57 10.6 -0.544 2.06 -- -- -- 0.18 16.4 -- -- -- --
308.84 0.818 10.6 -0.349 -- -1.66 -- -- 0.0822 -- 81.7 1228 -- --
115.98 0.502 10.6 -- 1.97 -1.34 -- -- 0.0886 16.9 72 1114 -- --
374.78 0.905 10.5 -0.625 -- -- -- -- 0.125 -- -- -- -- --
155.73 0.584 10.5 -- 2.07 -- -- -- 0.24 16.4 -- -- -- --
311.66 0.822 10.5 -- -- -1.71 -- -- 0.0862 -- 78.3 1217 -- --
385.09 0.916 10.5 -- -- -- -- -- 0.195 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 114.77 radiation 30 1440 < th dose independent rect. 8 5
2 114.78 humidity 80 720 < th dose dependent rect. 19 2
3 115.02 temperature 30 1440 < th dose independent sin 13 NA
9 115.32 radiation 30 1440 < th dose independent rect. 23 14
10 115.33 radiation 30 1440 < th dose independent rect. 1 12
16 115.35 temperature 30 1440 < th dose independent rect. 14 13
18 115.35 temperature 30 1440 < th dose independent rect. 14 18
19 115.35 radiation 30 1440 < th dose independent rect. 18 19
30 115.38 temperature 30 1440 < th dose independent rect. 14 11
32 115.43 temperature 30 1440 < th dose independent rect. 14 7
36 115.47 radiation 30 1440 < th dose independent rect. 15 22
37 115.49 temperature 30 1440 < th dose independent rect. 14 5
39 115.58 temperature 30 1440 > th dose independent sin 14 NA
40 115.60 temperature 30 1440 > th dose independent rect. 14 5
61 115.70 temperature 30 1440 < th dose independent rect. 14 20
68 115.80 radiation 30 1440 < th dose independent sin 7 NA
120 115.91 humidity 70 720 > th dose independent rect. 16 9
135 116.12 radiation 30 1440 < th dose independent rect. 8 3
137 116.12 humidity 70 1440 > th dose independent rect. 17 15
156 116.20 humidity 70 1440 > th dose independent rect. 17 3
171 116.24 radiation 40 1440 < th dose dependent rect. 8 5
223 116.51 temperature 30 1440 < th dose independent rect. 18 22
234 116.60 temperature 30 1440 < th dose independent rect. 9 23
235 116.61 temperature 30 1440 < th dose independent rect. 9 18
239 116.62 temperature 30 1440 < th dose independent rect. 9 16
258 116.65 temperature 30 1440 < th dose independent rect. 9 14
263 116.66 temperature 30 1440 < th dose independent rect. 9 12
276 116.70 temperature 30 1440 < th dose independent rect. 9 10
282 116.72 temperature 30 1440 > th dose independent rect. 18 22
296 116.83 temperature 30 1440 > th dose independent rect. 9 10
317 116.85 temperature 30 1440 < th dose independent rect. 6 21
320 116.85 temperature 30 1440 < th dose independent rect. 2 23
323 116.85 temperature 30 1440 < th dose independent rect. 20 23
324 116.85 temperature 30 1440 < th dose independent rect. 24 23
325 116.86 temperature 30 1440 < th dose independent no NA NA
329 116.86 temperature 30 1440 < th dose independent rect. 6 19
335 116.86 temperature 30 1440 < th dose independent rect. 24 21
377 116.89 temperature 30 1440 < th dose independent rect. 2 19
378 116.89 temperature 30 1440 < th dose independent rect. 24 19
385 116.90 temperature 30 1440 < th dose independent rect. 6 15
442 116.98 wind 7 43200 > th dose dependent rect. 17 1
445 117.00 humidity 60 1440 < th dose independent rect. 11 5
451 117.11 temperature 30 1440 > th dose independent no NA NA
547 117.17 humidity 60 1440 < th dose independent rect. 11 2
556 117.26 radiation 1 1440 > th dose dependent rect. 8 6
557 117.26 radiation 40 1440 < th dose dependent rect. 17 21
560 117.28 humidity 60 1440 > th dose independent rect. 11 5
565 117.32 temperature 30 1440 > th dose independent rect. 9 7
595 117.38 temperature 30 1440 < th dose independent rect. 9 7
619 117.43 humidity 70 1440 < th dose dependent rect. 11 6
620 117.44 humidity 60 720 > th dose independent rect. 14 5
626 117.46 radiation 40 1440 < th dose dependent rect. 23 15
628 117.47 radiation 40 1440 < th dose dependent rect. 1 13
632 117.49 radiation 30 1440 < th dose independent rect. 8 12
633 117.49 radiation 30 1440 < th dose independent rect. 8 20
642 117.51 radiation 30 1440 < th dose independent rect. 8 16
664 117.52 radiation 30 1440 < th dose independent rect. 12 23
675 117.55 temperature 30 1440 > th dose dependent rect. 15 1
678 117.57 temperature 30 1440 < th dose independent rect. 20 20
685 117.58 radiation 30 1440 < th dose independent rect. 23 21
693 117.59 radiation 30 1440 < th dose independent rect. 1 19
723 117.61 radiation 30 1440 < th dose independent no NA NA
728 117.61 temperature 30 1440 < th dose independent rect. 24 16
734 117.61 temperature 30 1440 < th dose independent rect. 22 18
741 117.61 radiation 30 1440 < th dose independent rect. 1 23
801 117.65 temperature 30 1440 < th dose independent rect. 2 14
808 117.66 temperature 30 1440 < th dose independent rect. 6 10
868 117.74 humidity 60 1440 > th dose independent rect. 11 17
871 117.74 humidity 70 1440 < th dose dependent rect. 11 9
897 117.76 humidity 60 1440 > th dose independent rect. 11 9
910 117.77 humidity 60 1440 > th dose independent rect. 11 13
914 117.78 humidity 60 720 > th dose independent rect. 15 2
960 117.83 humidity 60 1440 > th dose independent rect. 11 2
977 117.85 humidity 60 1440 < th dose independent rect. 11 9
1000 117.88 radiation 40 1440 < th dose dependent sin 4 NA