Os11g0226700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NB-ARC domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0226700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : NB-ARC domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.34 | 0.444 | 7.47 | 3.45 | 0.489 | -1.95 | -0.973 | -2.29 | 1.3 | 3.48 | 1.388 | 1461 | -- | -- |
| 93.59 | 0.451 | 7.47 | 3.69 | 0.44 | -1.8 | -0.939 | -- | 1.34 | 3.74 | 1.61 | 1475 | -- | -- |
| 91.74 | 0.446 | 7.46 | 3.48 | 0.538 | -1.88 | -- | -2.08 | 1.31 | 2.7 | 1.46 | 1445 | -- | -- |
| 95.47 | 0.455 | 7.46 | 3.72 | 0.525 | -1.72 | -- | -- | 1.35 | 2.73 | 1.6 | 1447 | -- | -- |
| 96.66 | 0.458 | 7.46 | 3.52 | -- | -2.06 | -- | -1.42 | 1.31 | -- | 1.6 | 1577 | -- | -- |
| 138.33 | 0.551 | 7.49 | 3.43 | 0.534 | -- | -0.942 | -- | 1.12 | 2.84 | -- | -- | -- | -- |
| 141.15 | 0.556 | 7.49 | 3.45 | 0.529 | -- | -- | -- | 1.13 | 2.39 | -- | -- | -- | -- |
| 96.97 | 0.459 | 7.45 | 3.68 | -- | -1.94 | -- | -- | 1.34 | -- | 1.6 | 1598 | -- | -- |
| 379.31 | 0.907 | 7.52 | -- | 0.174 | -2.37 | -- | -- | 0.996 | 1.73 | 9.28 | 3302 | -- | -- |
| 157.66 | 0.587 | 7.49 | 3.48 | -- | -- | -- | -- | 1.14 | -- | -- | -- | -- | -- |
| 455.41 | 0.998 | 7.58 | -- | 0.595 | -- | -- | -- | 0.744 | 2.49 | -- | -- | -- | -- |
| 352.3 | 0.874 | 7.51 | -- | -- | -2.51 | -- | -- | 1.23 | -- | 9.21 | 7684 | -- | -- |
| 476.28 | 1.02 | 7.57 | -- | -- | -- | -- | -- | 0.756 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.68 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 16 | 83.69 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 17 | 83.69 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 61 | 83.86 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 63 | 83.99 | temperature | 30 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 68 | 84.06 | temperature | 30 | 14400 | > th | dose independent | sin | 13 | NA |
| 71 | 84.12 | temperature | 30 | 14400 | < th | dose independent | sin | 13 | NA |
| 77 | 84.26 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 4 |
| 147 | 84.49 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 165 | 84.57 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 187 | 84.62 | temperature | 30 | 14400 | > th | dose dependent | sin | 13 | NA |
| 374 | 85.20 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 384 | 85.25 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 403 | 85.26 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 447 | 85.38 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 561 | 85.44 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 562 | 85.44 | temperature | 30 | 14400 | < th | dose independent | rect. | 7 | 12 |
| 782 | 85.90 | temperature | 30 | 14400 | > th | dose dependent | no | NA | NA |