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Os11g0226400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Nitrate-induced NOI family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.63 (0.0171) R2 : 0.00362
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0464 (0.0361) R2dN8 : 0.00467 R2N8 : 0.00362
σ : 0.323
deviance : 47.85
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
31.44 0.263 8.61 -0.0181 0.434 0.168 -0.154 1.14 0.0713 14.3 58 323 -- --
32.02 0.264 8.62 -0.0493 0.437 0.313 -0.0298 -- 0.0786 14.3 57.87 336 -- --
31.5 0.261 8.61 -0.0207 0.436 0.176 -- 1.12 0.0708 14.3 57.76 335 -- --
32.02 0.264 8.62 -0.0526 0.435 0.314 -- -- 0.0781 14.3 57.83 336 -- --
39.58 0.293 8.58 -0.077 -- 0.368 -- 0.193 0.0648 -- 72 234 -- --
33.68 0.272 8.63 -0.022 0.492 -- 0.0529 -- 0.054 14.7 -- -- -- --
33.69 0.272 8.63 -0.0207 0.493 -- -- -- 0.0544 14.7 -- -- -- --
39.01 0.291 8.63 -0.0648 -- 0.361 -- -- 0.0319 -- 73 243 -- --
31.81 0.263 8.62 -- 0.439 0.372 -- -- 0.0793 14.4 52.15 178 -- --
47.81 0.323 8.63 -0.0417 -- -- -- -- 0.0418 -- -- -- -- --
33.7 0.272 8.63 -- 0.493 -- -- -- 0.0567 14.7 -- -- -- --
39.12 0.291 8.63 -- -- 0.36 -- -- 0.0391 -- 72.7 243 -- --
47.85 0.323 8.63 -- -- -- -- -- 0.0464 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.47 temperature 10.0 270 > th dose dependent rect. 21 9
2 25.59 temperature 15.0 90 > th dose dependent rect. 23 8
17 26.78 temperature 20.0 90 > th dose independent rect. 23 8
19 26.84 temperature 20.0 10 > th dose dependent rect. 24 7
35 27.26 temperature 15.0 270 > th dose dependent rect. 7 3
40 27.49 temperature 15.0 270 > th dose dependent rect. 6 5
56 27.70 temperature 20.0 10 > th dose independent rect. 24 7
93 28.08 temperature 10.0 90 > th dose dependent rect. 13 18
95 28.10 temperature 15.0 270 > th dose independent rect. 6 15
96 28.10 humidity 60.0 270 > th dose independent rect. 16 19
106 28.17 radiation 10.0 270 < th dose independent rect. 21 10
117 28.22 atmosphere 995.0 270 > th dose independent rect. 6 15
120 28.23 humidity 50.0 270 > th dose independent rect. 6 15
121 28.25 temperature 20.0 90 > th dose independent rect. 13 18
129 28.31 temperature 20.0 270 > th dose independent rect. 6 5
132 28.32 temperature 20.0 270 > th dose independent rect. 7 3
136 28.34 temperature 15.0 10 > th dose dependent rect. 14 17
139 28.35 atmosphere 1015.0 90 < th dose dependent rect. 13 5
145 28.40 radiation 20.0 270 < th dose dependent rect. 21 10
148 28.42 radiation 40.0 90 < th dose independent rect. 11 7
150 28.43 radiation 1.0 270 < th dose independent rect. 21 19
168 28.49 wind 9.0 270 < th dose independent rect. 6 15
219 28.64 radiation 1.0 270 < th dose dependent rect. 21 19
221 28.67 atmosphere 995.0 270 > th dose independent rect. 16 19
229 28.68 radiation 40.0 90 < th dose dependent rect. 23 19
234 28.71 atmosphere 1015.0 270 < th dose dependent rect. 13 3
236 28.71 atmosphere 1015.0 270 < th dose dependent rect. 11 6
245 28.73 wind 9.0 270 < th dose independent rect. 21 9
252 28.74 temperature 30.0 270 < th dose independent rect. 15 20
253 28.75 temperature 10.0 1440 > th dose independent rect. 14 5
257 28.75 temperature 10.0 270 > th dose independent rect. 21 9
258 28.75 temperature 30.0 270 < th dose independent rect. 21 9
259 28.75 humidity 50.0 270 > th dose independent rect. 21 9
262 28.75 atmosphere 995.0 270 > th dose independent rect. 21 9
268 28.75 temperature 30.0 270 < th dose independent rect. 16 18
269 28.75 temperature 10.0 1440 > th dose independent rect. 19 19
272 28.75 atmosphere 995.0 1440 > th dose independent rect. 19 19
283 28.78 precipitation 0.1 270 < th dose independent rect. 6 15
288 28.78 precipitation 0.1 270 < th dose dependent rect. 6 15
296 28.80 precipitation 0.1 270 < th dose independent rect. 21 9
298 28.80 precipitation 0.1 270 < th dose dependent rect. 21 9
303 28.82 radiation 1.0 270 > th dose independent rect. 7 3
323 28.86 wind 7.0 90 < th dose independent rect. 18 19
350 28.90 atmosphere 1010.0 90 < th dose independent rect. 7 6
355 28.90 radiation 40.0 90 < th dose independent rect. 23 19
361 28.91 temperature 15.0 90 > th dose independent rect. 18 19
365 28.92 radiation 1.0 270 > th dose independent rect. 4 7
379 28.93 atmosphere 1010.0 270 < th dose independent rect. 7 2
405 28.98 temperature 25.0 720 > th dose independent rect. 21 5
435 29.02 precipitation 0.1 270 < th dose independent rect. 16 19
441 29.02 precipitation 0.1 270 < th dose dependent rect. 16 19
454 29.04 wind 1.0 270 > th dose independent rect. 11 5
456 29.04 temperature 30.0 30 < th dose independent rect. 18 8
462 29.05 temperature 30.0 270 < th dose independent rect. 16 6
463 29.05 atmosphere 1015.0 270 < th dose independent rect. 6 15
479 29.07 temperature 10.0 270 > th dose independent rect. 11 5
480 29.07 atmosphere 1015.0 270 < th dose independent rect. 11 5
481 29.07 precipitation 0.1 270 < th dose independent rect. 11 5
484 29.07 precipitation 0.1 270 < th dose dependent rect. 11 5
494 29.08 wind 1.0 270 > th dose independent rect. 10 8
495 29.08 precipitation 0.1 270 < th dose independent rect. 10 8
497 29.08 wind 9.0 270 < th dose independent rect. 18 16
498 29.08 precipitation 0.1 270 < th dose independent rect. 18 16
502 29.08 precipitation 0.1 270 < th dose dependent rect. 10 8
503 29.08 precipitation 0.1 270 < th dose dependent rect. 18 16
504 29.09 radiation 40.0 270 < th dose independent rect. 11 5
506 29.09 temperature 30.0 30 < th dose independent rect. 18 6
507 29.09 humidity 50.0 90 > th dose independent rect. 7 6
509 29.09 temperature 10.0 270 > th dose independent rect. 10 8
510 29.09 atmosphere 1015.0 270 < th dose independent rect. 10 8
511 29.09 atmosphere 1015.0 90 < th dose independent rect. 23 8
513 29.09 temperature 10.0 270 > th dose independent rect. 18 16
520 29.10 atmosphere 1010.0 10 < th dose independent rect. 7 6
526 29.10 wind 9.0 90 < th dose dependent rect. 23 8
541 29.12 wind 9.0 270 < th dose dependent rect. 6 5
547 29.13 wind 7.0 90 < th dose independent rect. 7 6
548 29.13 atmosphere 1015.0 270 < th dose independent rect. 21 9
558 29.15 atmosphere 1005.0 90 < th dose independent rect. 14 5
559 29.15 wind 7.0 270 < th dose independent rect. 5 6
570 29.16 atmosphere 1000.0 270 > th dose independent rect. 16 7
574 29.17 wind 9.0 90 < th dose independent rect. 23 8
575 29.17 temperature 10.0 90 > th dose independent rect. 23 8
576 29.17 temperature 30.0 90 < th dose independent rect. 23 8
577 29.17 humidity 50.0 90 > th dose independent rect. 23 8
579 29.17 atmosphere 995.0 90 > th dose independent rect. 23 8
580 29.17 radiation 40.0 90 < th dose independent rect. 23 8
582 29.17 radiation 1.0 30 < th dose dependent sin 15 NA
586 29.18 wind 9.0 270 < th dose independent rect. 11 5
597 29.19 radiation 40.0 10 < th dose independent rect. 12 6
614 29.20 atmosphere 1010.0 30 < th dose independent rect. 18 19
620 29.20 temperature 10.0 90 > th dose dependent rect. 7 16
647 29.23 atmosphere 995.0 270 > th dose dependent rect. 16 6
660 29.24 wind 9.0 270 < th dose dependent rect. 7 3
670 29.25 precipitation 0.1 90 < th dose independent rect. 23 8
675 29.25 radiation 40.0 90 < th dose independent rect. 11 20
676 29.25 atmosphere 995.0 270 > th dose independent rect. 15 22
682 29.25 precipitation 0.1 90 < th dose dependent rect. 23 8
693 29.27 humidity 50.0 270 > th dose independent rect. 5 6
701 29.27 wind 9.0 90 < th dose dependent rect. 7 16
714 29.29 radiation 40.0 30 < th dose dependent rect. 11 7
715 29.29 radiation 40.0 4320 < th dose dependent rect. 19 8
736 29.31 temperature 10.0 1440 > th dose independent rect. 19 8
739 29.31 temperature 30.0 1440 < th dose independent rect. 19 8
743 29.31 humidity 50.0 1440 > th dose independent rect. 19 8
745 29.31 atmosphere 995.0 1440 > th dose independent rect. 19 8
746 29.31 radiation 1.0 1440 < th dose independent rect. 19 8
766 29.31 temperature 10.0 1440 > th dose independent rect. 3 16
783 29.32 humidity 90.0 90 < th dose independent rect. 7 6
789 29.32 humidity 80.0 4320 < th dose dependent rect. 23 1
796 29.33 wind 9.0 270 < th dose independent rect. 10 8
804 29.34 precipitation 0.1 90 < th dose independent rect. 13 5
813 29.34 precipitation 0.1 90 < th dose dependent rect. 13 5
820 29.35 wind 5.0 270 < th dose independent rect. 7 3
826 29.35 radiation 40.0 10 < th dose independent rect. 12 19
835 29.36 precipitation 0.1 270 < th dose independent rect. 5 6
851 29.36 temperature 20.0 90 > th dose independent rect. 23 19
853 29.36 precipitation 0.1 270 < th dose dependent rect. 5 6
857 29.37 humidity 60.0 270 > th dose independent rect. 7 3
858 29.37 wind 1.0 90 > th dose independent rect. 13 5
862 29.37 radiation 1.0 270 > th dose independent rect. 16 21
866 29.37 radiation 20.0 4320 < th dose dependent rect. 19 6
873 29.38 temperature 10.0 1440 > th dose independent rect. 19 6
876 29.38 temperature 30.0 1440 < th dose independent rect. 19 6
880 29.38 humidity 50.0 1440 > th dose independent rect. 19 6
882 29.38 atmosphere 995.0 1440 > th dose independent rect. 19 6
883 29.38 radiation 1.0 1440 < th dose independent rect. 19 6
905 29.38 temperature 10.0 1440 > th dose independent rect. 1 18
909 29.38 radiation 1.0 90 > th dose independent rect. 11 20
919 29.39 temperature 10.0 90 > th dose independent rect. 13 5
930 29.39 radiation 20.0 90 < th dose independent rect. 23 19
941 29.40 humidity 50.0 270 > th dose independent rect. 16 7
946 29.40 temperature 20.0 270 > th dose dependent rect. 2 1
949 29.40 temperature 10.0 90 > th dose dependent rect. 13 5
961 29.41 atmosphere 995.0 270 > th dose independent rect. 5 6
966 29.41 temperature 10.0 270 > th dose independent rect. 11 18
973 29.42 wind 9.0 90 < th dose independent rect. 13 5
986 29.42 temperature 10.0 10 > th dose dependent rect. 7 16
992 29.43 wind 7.0 10 < th dose independent rect. 7 6