Os11g0224400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0224400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.62 | 0.31 | 2.9 | 0.098 | 0.116 | 0.943 | -0.256 | 0.406 | 0.0527 | 3.28 | 9.011 | 19 | -- | -- |
| 43.62 | 0.308 | 2.9 | 0.0969 | 0.117 | 0.835 | -0.265 | -- | 0.0532 | 3.26 | 9 | 18 | -- | -- |
| 43.8 | 0.308 | 2.9 | 0.101 | 0.115 | 0.971 | -- | 0.718 | 0.0527 | 3.74 | 9.014 | 18 | -- | -- |
| 43.83 | 0.308 | 2.9 | 0.0978 | 0.115 | 0.775 | -- | -- | 0.0531 | 3.74 | 9.024 | 18 | -- | -- |
| 44.52 | 0.311 | 2.9 | 0.101 | -- | 0.916 | -- | 0.814 | 0.0537 | -- | 9 | 18 | -- | -- |
| 45.12 | 0.315 | 2.9 | 0.0497 | 0.0909 | -- | -0.134 | -- | 0.0357 | 3.56 | -- | -- | -- | -- |
| 45.17 | 0.315 | 2.9 | 0.052 | 0.0921 | -- | -- | -- | 0.0365 | 4.05 | -- | -- | -- | -- |
| 44.55 | 0.311 | 2.9 | 0.0974 | -- | 0.689 | -- | -- | 0.0542 | -- | 9.018 | 18 | -- | -- |
| 44.07 | 0.309 | 2.9 | -- | 0.115 | 0.708 | -- | -- | 0.0412 | 3.76 | 9.035 | 18 | -- | -- |
| 45.63 | 0.316 | 2.9 | 0.0557 | -- | -- | -- | -- | 0.0389 | -- | -- | -- | -- | -- |
| 45.24 | 0.315 | 2.91 | -- | 0.0931 | -- | -- | -- | 0.0307 | 4.04 | -- | -- | -- | -- |
| 44.79 | 0.312 | 2.9 | -- | -- | 0.623 | -- | -- | 0.0425 | -- | 9.053 | 18 | -- | -- |
| 45.71 | 0.316 | 2.91 | -- | -- | -- | -- | -- | 0.0327 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.10 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 36.13 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 3 | 36.15 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 4 | 36.18 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 6 | 36.23 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 8 | 36.26 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 17 | 36.44 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 19 | 36.46 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 20 | 36.46 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 24 | 36.48 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 27 | 36.48 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 31 | 36.48 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 33 | 36.48 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 38 | 36.48 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 39 | 36.48 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 40 | 36.48 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 45 | 36.48 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 48 | 36.94 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 49 | 37.11 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 58 | 37.74 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 69 | 38.32 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 102 | 39.83 | wind | 1.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 113 | 41.35 | wind | 9.0 | 30 | > th | dose independent | rect. | 21 | 5 |
| 133 | 41.35 | wind | 9.0 | 30 | > th | dose dependent | rect. | 21 | 5 |
| 220 | 41.42 | wind | 5.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 221 | 41.42 | wind | 9.0 | 270 | > th | dose independent | rect. | 21 | 1 |
| 227 | 41.42 | wind | 3.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 228 | 41.42 | wind | 9.0 | 270 | > th | dose dependent | rect. | 21 | 1 |
| 253 | 41.44 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 2 |
| 271 | 41.44 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 284 | 41.45 | wind | 9.0 | 30 | > th | dose independent | rect. | 1 | 10 |
| 289 | 41.45 | wind | 9.0 | 30 | > th | dose dependent | rect. | 1 | 10 |
| 498 | 41.81 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 538 | 42.18 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 539 | 42.27 | wind | 7.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 542 | 42.29 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 545 | 42.29 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 549 | 42.29 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 558 | 42.29 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 559 | 42.29 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 579 | 42.29 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 583 | 42.29 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 627 | 42.40 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 628 | 42.40 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 639 | 42.48 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 641 | 42.49 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 8 |
| 662 | 42.55 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 667 | 42.60 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 672 | 42.67 | wind | 9.0 | 30 | > th | dose independent | sin | 9 | NA |
| 683 | 42.74 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 684 | 42.74 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 701 | 42.82 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 710 | 42.85 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 736 | 42.90 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 757 | 42.96 | humidity | 90.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 762 | 42.98 | wind | 9.0 | 30 | > th | dose dependent | sin | 8 | NA |
| 763 | 42.99 | wind | 1.0 | 30 | < th | dose independent | rect. | 24 | 3 |
| 833 | 43.10 | wind | 9.0 | 30 | < th | dose independent | sin | 9 | NA |
| 839 | 43.12 | humidity | 90.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 840 | 43.12 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 849 | 43.16 | temperature | 20.0 | 90 | < th | dose dependent | sin | 0 | NA |
| 852 | 43.17 | temperature | 20.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 896 | 43.24 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 966 | 43.40 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 991 | 43.44 | temperature | 20.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 1000 | 43.44 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |