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Os11g0222900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Disease resistance protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.17 (0.0558) R2 : 0.679
β1 : 2.05 (0.211) R2dD : 0.07 R2D : -0.0615
β2 : 3.28 (0.136) R2dC : 0.423 R2C : 0.345
β3 : -2.52 (0.277) R2dE : 0.0679 R2E : -0.0497
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 2.19 (0.121) R2dN8 : 0.314 R2N8 : 0.152
σ : 1.04
deviance : 496.97
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C
peak time of C : 21.6
E
wheather : humidity
threshold : 76.84
memory length : 1445
response mode : < th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 23.3
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
480.52 1.03 8.11 2.38 3.27 -3.61 -1.21 5.82 2.24 21.7 77.1 1446 23.4 --
504.74 1.05 8.11 2.38 3.27 -3.03 -1.21 -- 2.24 21.7 77.1 1446 23.4 --
485.94 1.03 8.1 2.44 3.28 -3.7 -- 6.02 2.23 21.6 77.18 1448 23.5 --
496.97 1.04 8.17 2.05 3.28 -2.52 -- -- 2.19 21.6 76.84 1445 23.3 --
581.05 1.12 8.13 1.44 -- -3.29 -- 1.52 1.95 -- 288.3 496 0.5 --
581.04 1.13 8.22 1.39 3.3 -- -1.55 -- 1.94 21.6 -- -- -- --
589.97 1.14 8.22 1.45 3.31 -- -- -- 1.95 21.6 -- -- -- --
589.97 1.13 8.13 1.45 -- -3.29 -- -- 1.95 -- 328.1 494 0.525 --
591.17 1.13 8.23 -- 3.25 -1.52 -- -- 2.04 21.7 76 1425 20.6 --
1237.82 1.64 8.13 1.48 -- -- -- -- 1.94 -- -- -- -- --
645.61 1.19 8.26 -- 3.31 -- -- -- 1.78 21.6 -- -- -- --
645.61 1.18 8.17 -- -- -3.3 -- -- 1.78 -- 360.1 505 0.584 --
1295.5 1.68 8.17 -- -- -- -- -- 1.78 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 481.26 humidity 50 1440 > th dose dependent rect. 4 8
3 481.58 humidity 90 1440 < th dose dependent rect. 2 10
11 482.92 humidity 80 1440 > th dose independent rect. 5 7
18 484.15 humidity 80 1440 < th dose independent rect. 5 7
50 487.94 humidity 60 1440 > th dose dependent rect. 11 1
52 488.05 humidity 60 1440 > th dose dependent rect. 9 3
123 491.96 humidity 60 30 > th dose dependent rect. 23 21
136 492.73 humidity 80 10 > th dose independent rect. 23 21
141 493.04 wind 7 14400 < th dose independent rect. 12 1
142 493.17 humidity 90 1440 < th dose dependent rect. 11 1
158 494.06 humidity 80 1440 < th dose independent sin 4 NA
166 494.26 wind 7 14400 > th dose independent rect. 12 1
190 495.26 humidity 80 1440 > th dose independent sin 4 NA
208 496.26 humidity 50 1440 > th dose dependent sin 4 NA
216 496.46 humidity 70 1440 > th dose independent rect. 19 17
217 496.50 humidity 90 1440 < th dose dependent sin 5 NA
230 497.11 humidity 70 1440 < th dose independent rect. 18 18
234 497.23 humidity 80 1440 < th dose dependent sin 7 NA
272 498.80 humidity 50 90 > th dose dependent rect. 21 23
276 498.98 humidity 80 1440 > th dose independent rect. 11 1
295 499.77 humidity 80 43200 < th dose dependent rect. 5 1
304 500.05 humidity 80 1440 < th dose independent rect. 11 1
307 500.11 wind 5 14400 > th dose dependent rect. 12 1
328 500.54 wind 7 14400 < th dose independent rect. 10 4
334 500.72 wind 7 14400 > th dose independent rect. 10 4
349 501.26 wind 7 14400 > th dose dependent rect. 5 9
386 502.25 humidity 80 10 > th dose independent rect. 7 13
391 502.33 wind 7 14400 > th dose dependent rect. 9 5
396 502.44 humidity 80 43200 < th dose independent rect. 4 2
410 502.72 wind 7 14400 > th dose independent rect. 5 9
419 502.94 humidity 70 1440 > th dose independent sin 9 NA
427 503.06 wind 7 14400 > th dose independent rect. 7 7
477 503.86 wind 7 14400 < th dose independent rect. 5 9
485 503.97 wind 7 14400 > th dose dependent rect. 24 14
490 504.15 wind 7 14400 < th dose independent rect. 7 7
508 504.54 wind 7 14400 > th dose dependent sin 3 NA
515 504.80 humidity 70 1440 < th dose independent sin 9 NA
564 505.63 humidity 80 10 > th dose independent rect. 1 19
612 506.32 wind 9 14400 < th dose independent rect. 18 21
631 506.59 wind 9 14400 < th dose independent rect. 22 16
651 506.81 humidity 80 10 > th dose dependent rect. 6 14
663 506.93 humidity 70 1440 > th dose independent rect. 9 1
678 507.13 humidity 90 30 < th dose dependent rect. 11 23
683 507.20 humidity 80 10 < th dose independent sin 1 NA
729 507.83 humidity 80 43200 > th dose independent rect. 5 1
758 508.11 wind 7 14400 > th dose dependent rect. 5 15
769 508.23 wind 9 14400 > th dose independent rect. 18 21
770 508.23 wind 9 14400 < th dose dependent rect. 12 1
771 508.25 wind 7 14400 > th dose independent sin 3 NA
773 508.26 wind 7 14400 > th dose dependent rect. 7 13
777 508.27 humidity 60 90 > th dose dependent rect. 23 15
792 508.37 wind 7 14400 > th dose dependent rect. 9 11
808 508.44 wind 7 14400 > th dose dependent rect. 24 20
820 508.53 humidity 90 30 < th dose dependent rect. 7 16
870 508.85 humidity 90 30 < th dose dependent rect. 6 19
890 509.02 wind 9 14400 > th dose dependent rect. 18 21
909 509.16 wind 7 14400 < th dose independent sin 2 NA
915 509.18 wind 1 14400 > th dose dependent rect. 12 1
918 509.21 humidity 80 10 > th dose independent sin 2 NA
922 509.27 radiation 1 1440 < th dose independent rect. 15 17
937 509.42 wind 7 14400 < th dose independent rect. 1 15
946 509.50 humidity 80 10 > th dose independent rect. 7 11
956 509.54 radiation 1 1440 < th dose independent rect. 16 20
968 509.64 radiation 1 1440 > th dose independent rect. 15 17
991 509.73 radiation 1 1440 < th dose independent sin 12 NA