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Os11g0222200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.76 (0.0369) R2 : 0.786
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.61 (0.123) R2dC : 0.347 R2C : 0.635
β3 : 2.13 (0.154) R2dE : 0.147 R2E : 0.432
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.179 (0.0776) R2dN8 : 0.00371 R2N8 : 0.00419
σ : 0.692
deviance : 221.06
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_____
C
peak time of C : 16.8
E
wheather : temperature
threshold : 1.459
memory length : 20
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 8.87
open length of G : 20.1

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
211.33 0.683 6.75 0.539 2.65 2.06 0.436 1.26 -0.167 16.9 5.505 14 8.9 20.1
212.83 0.679 6.77 0.477 2.62 2.1 0.679 -- -0.188 16.8 4.417 13 8.92 20.1
210.94 0.676 6.74 0.562 2.63 2.07 -- 1.59 -0.13 16.9 1.65 18 8.88 20.1
214.45 0.682 6.76 0.508 2.66 2.05 -- -- -0.148 16.8 1.138 18 8.88 20.1
289.35 0.792 6.77 0.275 -- 3.81 -- 0.402 -0.248 -- 5.183 190 8.17 16.2
294.35 0.804 6.77 0.715 3.69 -- 1.25 -- -0.107 17 -- -- -- --
298.31 0.809 6.76 0.717 3.7 -- -- -- -0.101 17 -- -- -- --
267.21 0.761 6.72 0.483 -- 3.89 -- -- -0.178 -- 2.515 255 7.97 14.5
221.06 0.692 6.76 -- 2.61 2.13 -- -- -0.179 16.8 1.459 20 8.87 20.1
1016.59 1.49 6.72 0.583 -- -- -- -- -0.195 -- -- -- -- --
311.88 0.826 6.78 -- 3.68 -- -- -- -0.181 17 -- -- -- --
268.57 0.763 6.72 -- -- 3.81 -- -- -0.182 -- -0.8014 252 7.93 14.7
1025.56 1.49 6.74 -- -- -- -- -- -0.26 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 216.90 temperature 10.0 10 > th dose dependent rect. 9 20
2 218.52 wind 7.0 270 < th dose independent rect. 7 20
3 218.74 radiation 20.0 270 < th dose dependent rect. 3 5
5 219.26 radiation 10.0 270 < th dose independent rect. 3 4
8 219.44 wind 5.0 270 < th dose independent rect. 3 4
11 219.68 radiation 20.0 270 < th dose independent rect. 2 7
12 219.69 precipitation 0.1 270 < th dose independent rect. 7 20
13 219.69 precipitation 0.1 270 < th dose dependent rect. 7 20
17 220.11 precipitation 0.1 270 < th dose independent rect. 3 4
18 220.11 precipitation 0.1 270 < th dose dependent rect. 3 4
25 220.69 wind 9.0 270 < th dose independent rect. 6 22
26 220.86 wind 5.0 270 < th dose independent rect. 4 2
32 221.47 humidity 70.0 270 > th dose independent rect. 3 4
35 221.56 temperature 10.0 270 > th dose independent rect. 3 4
37 221.56 temperature 30.0 270 < th dose independent rect. 3 4
38 221.56 humidity 50.0 270 > th dose independent rect. 3 4
40 221.56 atmosphere 995.0 270 > th dose independent rect. 3 4
41 221.56 atmosphere 1015.0 270 < th dose independent rect. 3 4
43 221.56 temperature 10.0 270 > th dose independent rect. 7 20
45 221.93 radiation 30.0 90 < th dose independent rect. 5 4
49 222.24 precipitation 0.1 270 < th dose independent rect. 4 2
50 222.24 precipitation 0.1 270 < th dose dependent rect. 4 2
52 222.45 radiation 1.0 30 > th dose independent rect. 5 4
63 222.46 wind 9.0 10 < th dose independent rect. 9 20
64 222.48 atmosphere 1010.0 270 < th dose independent rect. 4 2
71 222.99 radiation 40.0 90 < th dose dependent rect. 5 4
86 223.14 temperature 10.0 90 > th dose independent rect. 5 3
88 223.14 temperature 30.0 90 < th dose independent rect. 5 3
89 223.14 humidity 50.0 90 > th dose independent rect. 5 3
91 223.14 atmosphere 995.0 90 > th dose independent rect. 5 3
103 223.18 radiation 20.0 270 < th dose independent rect. 4 2
106 223.18 temperature 10.0 270 > th dose independent rect. 6 22
107 223.32 wind 1.0 270 > th dose independent rect. 3 4
108 223.36 precipitation 0.1 10 < th dose independent rect. 5 4
109 223.36 precipitation 0.1 10 < th dose dependent rect. 5 4
111 223.48 radiation 40.0 270 < th dose dependent rect. 4 2
113 223.59 wind 7.0 270 < th dose independent rect. 8 18
117 223.68 radiation 40.0 10 < th dose independent rect. 5 17
118 223.79 wind 7.0 10 < th dose independent rect. 5 4
120 223.79 temperature 10.0 10 > th dose independent rect. 5 4
122 223.79 temperature 30.0 10 < th dose independent rect. 5 4
123 223.79 humidity 50.0 10 > th dose independent rect. 5 4
125 223.79 atmosphere 995.0 10 > th dose independent rect. 5 4
126 223.79 atmosphere 1015.0 10 < th dose independent rect. 5 4
127 223.79 temperature 10.0 10 > th dose independent rect. 9 20
146 224.10 precipitation 0.1 270 < th dose independent rect. 6 22
147 224.10 precipitation 0.1 270 < th dose dependent rect. 6 22
173 224.86 wind 1.0 90 > th dose independent rect. 5 3
191 225.39 precipitation 0.1 270 < th dose independent rect. 8 18
192 225.39 precipitation 0.1 270 < th dose dependent rect. 8 18
193 225.40 radiation 20.0 270 < th dose dependent rect. 3 14
197 225.56 radiation 40.0 10 < th dose independent rect. 5 4
200 225.65 radiation 40.0 270 < th dose dependent rect. 3 14
212 226.08 precipitation 0.1 270 < th dose independent rect. 2 6
214 226.08 precipitation 0.1 270 < th dose dependent rect. 2 6
257 226.71 radiation 20.0 270 < th dose dependent rect. 3 10
277 226.88 wind 9.0 270 < th dose dependent rect. 4 2
311 227.22 humidity 70.0 270 > th dose independent rect. 2 6
314 227.26 wind 9.0 10 < th dose dependent rect. 5 4
316 227.35 wind 1.0 270 > th dose independent rect. 2 6
321 227.39 temperature 10.0 270 > th dose independent rect. 2 6
323 227.39 temperature 30.0 270 < th dose independent rect. 2 6
324 227.39 humidity 50.0 270 > th dose independent rect. 2 6
326 227.39 atmosphere 995.0 270 > th dose independent rect. 2 6
327 227.39 atmosphere 1015.0 270 < th dose independent rect. 2 6
328 227.39 temperature 10.0 270 > th dose independent rect. 8 18
329 227.39 wind 9.0 270 < th dose dependent rect. 3 4
363 227.75 radiation 40.0 90 < th dose dependent rect. 5 6
386 228.20 radiation 40.0 270 < th dose dependent rect. 15 16
400 228.51 atmosphere 995.0 10 > th dose independent rect. 9 20
427 228.87 temperature 30.0 270 < th dose dependent rect. 3 3
445 229.24 radiation 40.0 10 < th dose independent rect. 5 15
466 229.58 temperature 30.0 90 < th dose dependent rect. 5 4
523 230.38 radiation 40.0 10 < th dose dependent rect. 5 17
529 230.53 temperature 10.0 90 > th dose dependent rect. 5 3
548 230.90 temperature 10.0 10 > th dose dependent rect. 5 4
553 230.95 humidity 50.0 90 > th dose dependent rect. 5 4
557 231.01 atmosphere 995.0 90 > th dose dependent rect. 5 3
585 231.61 wind 9.0 270 < th dose dependent rect. 7 20
586 231.69 humidity 50.0 270 > th dose dependent rect. 4 2
588 231.80 radiation 1.0 270 < th dose independent rect. 3 15
595 231.95 atmosphere 995.0 10 > th dose dependent rect. 5 4
604 232.06 radiation 20.0 30 < th dose independent rect. 5 17
608 232.10 radiation 20.0 270 < th dose independent rect. 15 16
609 232.19 humidity 50.0 270 > th dose dependent rect. 3 4
617 232.35 humidity 60.0 90 > th dose dependent rect. 5 14
628 232.71 temperature 10.0 1440 > th dose independent rect. 5 5
631 232.71 atmosphere 995.0 1440 > th dose independent rect. 5 5
632 232.71 atmosphere 1015.0 1440 < th dose independent rect. 5 5
633 232.71 temperature 10.0 1440 > th dose independent rect. 10 19
643 232.77 temperature 10.0 270 > th dose dependent rect. 3 4
680 233.33 humidity 70.0 30 > th dose independent rect. 5 15
692 233.63 radiation 40.0 10 < th dose dependent rect. 5 5
703 233.78 radiation 1.0 30 < th dose dependent sin 10 NA
713 233.94 radiation 40.0 90 < th dose dependent rect. 5 14
718 234.03 humidity 50.0 10 > th dose dependent rect. 5 17
737 234.40 radiation 10.0 270 < th dose independent rect. 3 10
760 234.73 humidity 50.0 270 > th dose independent rect. 15 16
765 234.76 atmosphere 1005.0 90 > th dose independent rect. 5 3
767 234.79 radiation 1.0 30 < th dose independent sin 10 NA
768 234.84 radiation 40.0 90 < th dose dependent rect. 5 12
807 235.22 radiation 1.0 30 > th dose independent sin 10 NA
812 235.27 atmosphere 1015.0 10 < th dose independent rect. 9 20
838 235.53 wind 7.0 270 < th dose independent rect. 7 8
851 235.73 radiation 40.0 270 < th dose independent rect. 11 21
856 235.80 humidity 60.0 90 > th dose dependent rect. 5 6
880 236.07 wind 9.0 1440 < th dose independent rect. 6 3
884 236.07 humidity 50.0 1440 > th dose independent rect. 6 3
915 236.29 humidity 90.0 10 < th dose independent rect. 5 4
920 236.36 temperature 10.0 90 > th dose dependent rect. 8 7
946 236.48 atmosphere 1015.0 10 < th dose dependent rect. 5 4
955 236.55 humidity 70.0 30 > th dose independent rect. 5 13
963 236.61 radiation 40.0 10 < th dose dependent rect. 5 15