Os11g0222000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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Os11g0222000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.61 | 0.487 | 8.81 | -1.13 | 0.814 | 0.874 | 0.573 | -0.938 | 0.0605 | 4.47 | 31.65 | 1116 | -- | -- |
| 107.65 | 0.483 | 8.8 | -0.996 | 0.81 | 0.773 | 0.558 | -- | 0.0582 | 4.44 | 31.7 | 1110 | -- | -- |
| 108.48 | 0.485 | 8.81 | -1.11 | 0.817 | 0.862 | -- | -0.79 | 0.0579 | 4.4 | 31.7 | 1116 | -- | -- |
| 108.49 | 0.485 | 8.8 | -0.986 | 0.815 | 0.773 | -- | -- | 0.0591 | 4.4 | 31.7 | 1116 | -- | -- |
| 143.48 | 0.558 | 8.79 | -0.9 | -- | 0.809 | -- | 0.473 | 0.108 | -- | 31.4 | 1161 | -- | -- |
| 135.21 | 0.545 | 8.83 | -0.797 | 0.892 | -- | 0.688 | -- | -0.0748 | 4.05 | -- | -- | -- | -- |
| 136.55 | 0.547 | 8.83 | -0.805 | 0.895 | -- | -- | -- | -0.0786 | 3.99 | -- | -- | -- | -- |
| 143.49 | 0.558 | 8.8 | -0.985 | -- | 0.868 | -- | -- | 0.099 | -- | 31.4 | 1154 | -- | -- |
| 133.43 | 0.538 | 8.78 | -- | 0.833 | 0.653 | -- | -- | 0.136 | 4.46 | 32.13 | 1087 | -- | -- |
| 180.27 | 0.627 | 8.84 | -0.769 | -- | -- | -- | -- | -0.0548 | -- | -- | -- | -- | -- |
| 153.65 | 0.58 | 8.81 | -- | 0.879 | -- | -- | -- | 0.0111 | 4.01 | -- | -- | -- | -- |
| 168.07 | 0.604 | 8.78 | -- | -- | 0.743 | -- | -- | 0.181 | -- | 31.98 | 1131 | -- | -- |
| 195.86 | 0.653 | 8.82 | -- | -- | -- | -- | -- | 0.0305 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.30 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 12 |
| 2 | 104.79 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 10 |
| 9 | 105.49 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 5 |
| 14 | 105.81 | humidity | 70.0 | 720 | > th | dose independent | sin | 14 | NA |
| 17 | 106.06 | humidity | 70.0 | 720 | < th | dose independent | sin | 13 | NA |
| 30 | 106.71 | humidity | 70.0 | 720 | < th | dose independent | rect. | 15 | 17 |
| 31 | 106.73 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 16 |
| 32 | 106.78 | humidity | 70.0 | 720 | < th | dose independent | rect. | 15 | 5 |
| 47 | 106.90 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 54 | 107.26 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 15 | 11 |
| 56 | 107.28 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 17 | 10 |
| 79 | 107.65 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 85 | 107.74 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 18 |
| 111 | 108.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 16 |
| 112 | 108.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 124 | 108.26 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 18 |
| 142 | 108.33 | temperature | 30.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 169 | 108.53 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 174 | 108.60 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 184 | 108.76 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 208 | 109.25 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 12 |
| 215 | 109.32 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 16 |
| 251 | 109.58 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 279 | 109.76 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 280 | 109.76 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 281 | 109.76 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 282 | 109.76 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 8 |
| 283 | 109.76 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 284 | 109.76 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 288 | 109.83 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 289 | 109.83 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 290 | 109.83 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 291 | 109.84 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 319 | 110.06 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 322 | 110.07 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 328 | 110.17 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 334 | 110.22 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 341 | 110.29 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 365 | 110.37 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 375 | 110.45 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 406 | 110.64 | humidity | 70.0 | 10 | > th | dose independent | rect. | 18 | 10 |
| 432 | 110.76 | temperature | 30.0 | 720 | < th | dose independent | sin | 14 | NA |
| 434 | 110.76 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 503 | 111.03 | wind | 5.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 518 | 111.05 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 522 | 111.05 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 529 | 111.05 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 536 | 111.07 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 538 | 111.08 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 544 | 111.13 | humidity | 70.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 568 | 111.29 | temperature | 30.0 | 720 | > th | dose independent | sin | 13 | NA |
| 606 | 111.37 | humidity | 80.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 609 | 111.38 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 650 | 111.47 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 690 | 111.64 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 707 | 111.73 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 710 | 111.74 | humidity | 90.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 711 | 111.74 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 717 | 111.76 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 741 | 111.90 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 793 | 111.97 | temperature | 30.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 891 | 112.19 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 894 | 112.21 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 895 | 112.21 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 913 | 112.28 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 916 | 112.28 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 930 | 112.34 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 948 | 112.39 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 16 | 17 |
| 950 | 112.39 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 16 | 17 |
| 981 | 112.46 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 993 | 112.48 | radiation | 1.0 | 270 | > th | dose independent | sin | 16 | NA |