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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0219400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ankyrin repeat containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.09 (0.0179) R2 : 0.00221
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0379 (0.0377) R2dN8 : 0.00286 R2N8 : 0.00221
σ : 0.337
deviance : 52.16
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
50.05 0.332 3.1 0.123 0.191 0.121 -0.0957 0.153 0.0222 5.88 89.91 96 -- --
50.17 0.33 3.1 0.111 0.195 0.128 -0.164 -- 0.0183 5.83 89.97 100 -- --
50.07 0.33 3.1 0.124 0.192 0.122 -- 0.172 0.0231 5.9 89.79 100 -- --
50.23 0.33 3.09 0.11 0.192 0.125 -- -- 0.0206 6.01 89.86 100 -- --
51.51 0.336 3.1 0.12 -- 0.0227 -- 0.232 0.0457 -- 89.32 93 -- --
50.99 0.335 3.09 0.0949 0.131 -- -0.033 -- 0.0465 7.49 -- -- -- --
50.99 0.334 3.09 0.0943 0.131 -- -- -- 0.0466 7.61 -- -- -- --
51.69 0.335 3.09 0.113 -- 0.0571 -- -- 0.0378 -- 89 66 -- --
50.54 0.331 3.1 -- 0.189 0.118 -- -- 0.00994 6.04 89.47 100 -- --
51.92 0.337 3.09 0.0962 -- -- -- -- 0.0486 -- -- -- -- --
51.23 0.335 3.09 -- 0.132 -- -- -- 0.0361 7.56 -- -- -- --
51.97 0.336 3.1 -- -- 0.0486 -- -- 0.0249 -- 89.13 66 -- --
52.16 0.337 3.09 -- -- -- -- -- 0.0379 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.76 atmosphere 1005.0 90 > th dose dependent rect. 2 1
2 47.91 atmosphere 1005.0 10 > th dose dependent rect. 2 2
3 47.92 atmosphere 995.0 720 > th dose independent rect. 23 16
5 48.05 temperature 10.0 720 > th dose independent rect. 15 8
6 48.05 temperature 10.0 720 > th dose independent rect. 23 16
7 48.11 temperature 10.0 720 > th dose independent rect. 3 8
8 48.11 humidity 50.0 720 > th dose independent rect. 3 8
9 48.11 atmosphere 995.0 720 > th dose independent rect. 3 8
10 48.11 temperature 10.0 720 > th dose independent rect. 11 16
11 48.12 precipitation 0.1 720 < th dose independent rect. 15 8
12 48.12 precipitation 0.1 720 < th dose dependent rect. 15 8
14 48.28 wind 9.0 720 < th dose independent rect. 3 8
15 48.32 precipitation 0.1 720 < th dose independent rect. 11 16
16 48.32 precipitation 0.1 720 < th dose dependent rect. 11 16
17 48.38 atmosphere 1005.0 90 > th dose independent rect. 2 1
18 48.38 radiation 1.0 14400 < th dose dependent rect. 3 1
27 48.41 wind 9.0 1440 < th dose independent rect. 3 1
28 48.41 temperature 10.0 1440 > th dose independent rect. 3 1
31 48.41 temperature 30.0 1440 < th dose independent rect. 3 1
35 48.41 humidity 50.0 1440 > th dose independent rect. 3 1
44 48.41 atmosphere 995.0 1440 > th dose independent rect. 3 1
45 48.41 radiation 1.0 1440 < th dose independent rect. 3 1
65 48.41 temperature 10.0 1440 > th dose independent rect. 4 23
79 48.42 atmosphere 995.0 720 > th dose independent rect. 15 8
80 48.42 temperature 20.0 30 > th dose dependent rect. 2 1
81 48.43 temperature 20.0 30 > th dose independent rect. 2 1
83 48.45 atmosphere 1000.0 30 > th dose independent rect. 3 23
91 48.47 wind 3.0 30 < th dose independent rect. 2 1
94 48.47 humidity 90.0 30 > th dose independent rect. 2 1
95 48.47 wind 7.0 30 < th dose dependent rect. 2 1
98 48.48 temperature 10.0 30 > th dose independent rect. 2 1
100 48.48 temperature 30.0 30 < th dose independent rect. 2 1
101 48.48 humidity 50.0 30 > th dose independent rect. 2 1
106 48.48 atmosphere 1010.0 30 < th dose independent rect. 2 1
108 48.48 radiation 1.0 30 < th dose independent rect. 2 1
113 48.48 precipitation 0.1 30 < th dose independent rect. 2 1
114 48.48 temperature 10.0 30 > th dose independent rect. 3 23
115 48.48 wind 3.0 30 < th dose dependent rect. 2 1
117 48.48 humidity 50.0 30 > th dose dependent rect. 2 1
121 48.48 radiation 1.0 30 < th dose dependent rect. 2 1
126 48.48 precipitation 0.1 30 < th dose dependent rect. 2 1
127 48.49 atmosphere 995.0 720 > th dose independent rect. 11 16
132 48.53 wind 1.0 30 > th dose independent rect. 2 1
134 48.53 atmosphere 1015.0 30 < th dose dependent rect. 2 1
139 48.56 temperature 30.0 30 < th dose dependent rect. 2 1
142 48.58 radiation 40.0 720 < th dose independent rect. 15 8
151 48.63 precipitation 0.1 30 < th dose independent rect. 3 23
153 48.63 precipitation 0.1 30 < th dose dependent rect. 3 23
205 48.79 precipitation 0.1 720 < th dose independent rect. 3 8
206 48.79 precipitation 0.1 720 < th dose dependent rect. 3 8
208 48.81 humidity 90.0 90 < th dose independent rect. 2 1
209 48.81 wind 1.0 10 < th dose independent rect. 6 12
215 48.83 humidity 50.0 30 > th dose independent rect. 3 23
221 48.87 wind 1.0 10 < th dose independent rect. 6 10
240 48.90 wind 1.0 10 < th dose independent rect. 6 8
248 48.91 atmosphere 1015.0 720 < th dose independent rect. 3 8
251 48.92 wind 1.0 720 > th dose independent rect. 15 8
256 48.95 wind 9.0 720 < th dose independent rect. 15 8
257 48.95 humidity 90.0 90 < th dose independent rect. 1 22
268 49.04 precipitation 0.1 720 < th dose independent rect. 23 16
269 49.04 precipitation 0.1 720 < th dose dependent rect. 23 16
272 49.08 wind 9.0 30 < th dose independent rect. 3 23
278 49.12 wind 1.0 90 < th dose dependent rect. 9 7
281 49.13 wind 1.0 10 < th dose independent rect. 6 21
284 49.14 wind 9.0 30 < th dose independent rect. 23 23
285 49.14 wind 1.0 10 < th dose dependent rect. 6 12
290 49.16 temperature 25.0 30 > th dose dependent rect. 22 1
294 49.16 wind 1.0 10 < th dose dependent rect. 6 10
298 49.17 wind 7.0 1440 < th dose independent rect. 23 1
307 49.18 wind 1.0 10 < th dose dependent rect. 6 8
308 49.19 temperature 25.0 30 > th dose independent rect. 22 1
311 49.19 humidity 90.0 30 < th dose dependent rect. 22 1
315 49.20 temperature 10.0 1440 > th dose independent rect. 23 1
318 49.20 temperature 30.0 1440 < th dose independent rect. 23 1
322 49.20 humidity 50.0 1440 > th dose independent rect. 23 1
332 49.20 humidity 90.0 30 < th dose independent rect. 22 1
333 49.20 atmosphere 995.0 1440 > th dose independent rect. 23 1
334 49.20 radiation 1.0 1440 < th dose independent rect. 23 1
354 49.20 temperature 25.0 30 > th dose independent rect. 20 3
359 49.20 temperature 10.0 1440 > th dose independent rect. 24 23
362 49.20 temperature 30.0 30 < th dose independent rect. 3 23
364 49.20 radiation 1.0 1440 < th dose dependent rect. 23 1
375 49.21 atmosphere 1005.0 30 > th dose independent rect. 22 1
378 49.21 atmosphere 1000.0 30 > th dose dependent rect. 22 1
385 49.22 wind 1.0 30 > th dose independent rect. 22 1
386 49.22 wind 3.0 30 < th dose independent rect. 22 1
390 49.22 temperature 10.0 30 > th dose independent rect. 22 1
392 49.22 temperature 30.0 30 < th dose independent rect. 22 1
393 49.22 humidity 50.0 30 > th dose independent rect. 22 1
396 49.22 atmosphere 995.0 30 > th dose independent rect. 22 1
398 49.22 atmosphere 1010.0 30 < th dose independent rect. 22 1
400 49.22 radiation 1.0 30 < th dose independent rect. 22 1
405 49.22 precipitation 0.1 30 < th dose independent rect. 22 1
411 49.22 temperature 10.0 30 > th dose independent rect. 23 23
412 49.22 wind 1.0 30 > th dose dependent rect. 22 1
415 49.22 radiation 1.0 30 < th dose dependent rect. 22 1
420 49.22 precipitation 0.1 30 < th dose dependent rect. 22 1
424 49.23 wind 5.0 30 < th dose dependent rect. 22 1
427 49.23 humidity 50.0 30 > th dose dependent rect. 22 1
435 49.25 wind 1.0 10 > th dose independent rect. 23 23
437 49.25 atmosphere 995.0 30 > th dose independent rect. 23 23
440 49.25 atmosphere 1015.0 30 < th dose dependent rect. 22 1
441 49.25 atmosphere 1005.0 30 > th dose dependent rect. 20 3
443 49.25 wind 5.0 10 > th dose dependent rect. 24 11
445 49.26 wind 9.0 720 < th dose independent rect. 23 16
454 49.28 wind 1.0 90 < th dose independent rect. 7 9
459 49.28 temperature 30.0 30 < th dose dependent rect. 22 1
470 49.29 wind 5.0 10 > th dose dependent rect. 7 4
508 49.32 wind 1.0 90 < th dose independent rect. 7 7
526 49.34 precipitation 0.1 720 < th dose independent rect. 19 8
527 49.34 radiation 10.0 30 < th dose independent rect. 23 9
533 49.34 precipitation 0.1 720 < th dose dependent rect. 19 8
549 49.37 wind 5.0 10 > th dose dependent rect. 9 2
560 49.39 wind 1.0 10 > th dose independent rect. 23 21
576 49.41 precipitation 0.1 1440 < th dose independent rect. 23 1
579 49.41 precipitation 0.1 1440 < th dose dependent rect. 23 1
587 49.43 humidity 60.0 10 < th dose independent rect. 10 1
590 49.43 atmosphere 995.0 720 > th dose independent rect. 7 8
594 49.43 humidity 60.0 10 < th dose dependent rect. 10 1
603 49.44 atmosphere 1010.0 10 < th dose independent rect. 23 8
605 49.44 wind 1.0 10 > th dose independent rect. 10 10
610 49.45 wind 9.0 720 < th dose independent rect. 19 8
613 49.45 wind 3.0 30 < th dose dependent rect. 2 6
614 49.46 wind 1.0 10 < th dose independent rect. 9 18
624 49.47 precipitation 0.1 720 < th dose independent rect. 15 16
625 49.47 wind 3.0 30 < th dose dependent rect. 2 11
626 49.47 precipitation 0.1 720 < th dose dependent rect. 15 16
627 49.48 atmosphere 1005.0 30 > th dose independent rect. 20 3
629 49.48 humidity 90.0 90 < th dose dependent rect. 2 1
640 49.49 radiation 30.0 30 < th dose dependent rect. 23 10
689 49.51 temperature 10.0 720 > th dose independent rect. 19 8
690 49.51 temperature 30.0 720 < th dose independent rect. 19 8
691 49.51 humidity 50.0 720 > th dose independent rect. 19 8
692 49.51 atmosphere 995.0 720 > th dose independent rect. 19 8
693 49.51 radiation 1.0 720 < th dose independent rect. 19 8
698 49.51 wind 7.0 30 > th dose independent rect. 1 10
701 49.51 radiation 30.0 10 < th dose independent rect. 23 12
703 49.51 temperature 10.0 720 > th dose independent rect. 3 16
717 49.51 radiation 1.0 720 < th dose dependent rect. 19 8
730 49.52 wind 7.0 10 > th dose independent rect. 9 2
753 49.52 atmosphere 1010.0 30 < th dose independent rect. 23 10
771 49.52 radiation 40.0 30 < th dose dependent rect. 23 12
779 49.53 temperature 10.0 720 > th dose independent rect. 7 8
781 49.53 atmosphere 1015.0 720 < th dose independent rect. 7 8
803 49.53 temperature 10.0 720 > th dose independent rect. 15 16
805 49.53 atmosphere 995.0 720 > th dose independent rect. 3 23
819 49.54 humidity 60.0 10 > th dose independent rect. 14 12
820 49.54 radiation 40.0 30 < th dose independent rect. 14 12
825 49.54 temperature 25.0 90 > th dose dependent rect. 20 3
826 49.54 atmosphere 1005.0 10 > th dose dependent rect. 2 6
833 49.55 atmosphere 1000.0 10 > th dose independent rect. 14 12
882 49.57 radiation 30.0 1440 < th dose independent rect. 24 7
928 49.59 humidity 90.0 90 < th dose independent rect. 1 13
929 49.59 humidity 50.0 720 > th dose independent rect. 23 16
930 49.59 atmosphere 995.0 720 > th dose independent rect. 3 16
934 49.59 atmosphere 995.0 720 > th dose independent rect. 15 23
969 49.60 humidity 90.0 30 < th dose independent rect. 20 3
972 49.60 humidity 90.0 90 < th dose independent rect. 1 6
973 49.60 atmosphere 995.0 720 > th dose independent rect. 15 16
979 49.60 temperature 25.0 720 > th dose dependent rect. 3 5
986 49.61 atmosphere 995.0 720 > th dose independent rect. 14 1
991 49.61 wind 9.0 10 < th dose independent rect. 2 12