Os11g0215400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase A1, pepsin family protein.
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Os11g0215400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase A1, pepsin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.38 | 0.563 | 4.28 | 0.825 | 0.297 | -1.59 | 0.59 | 1.15 | 0.151 | 5.85 | 9.103 | 4211 | -- | -- |
| 145.49 | 0.562 | 4.3 | 0.648 | 0.28 | -1.69 | 0.684 | -- | 0.183 | 5.74 | 10.2 | 6879 | -- | -- |
| 144.23 | 0.559 | 4.28 | 0.843 | 0.3 | -1.59 | -- | 1.2 | 0.152 | 5.88 | 10.07 | 4212 | -- | -- |
| 146.63 | 0.564 | 4.3 | 0.657 | 0.289 | -1.69 | -- | -- | 0.184 | 5.86 | 0.8469 | 6925 | -- | -- |
| 147.25 | 0.565 | 4.28 | 0.837 | -- | -1.64 | -- | 1.41 | 0.172 | -- | 9.654 | 3437 | -- | -- |
| 193.64 | 0.652 | 4.39 | -0.197 | 0.255 | -- | 0.636 | -- | -0.244 | 6.7 | -- | -- | -- | -- |
| 194.63 | 0.653 | 4.39 | -0.186 | 0.257 | -- | -- | -- | -0.245 | 7.05 | -- | -- | -- | -- |
| 148.74 | 0.568 | 4.32 | 0.607 | -- | -1.68 | -- | -- | 0.0908 | -- | 8.009 | 4856 | -- | -- |
| 149.35 | 0.569 | 4.34 | -- | 0.172 | -1.54 | -- | -- | 0.00692 | 6.76 | 11.39 | 1834 | -- | -- |
| 198.12 | 0.658 | 4.4 | -0.18 | -- | -- | -- | -- | -0.24 | -- | -- | -- | -- | -- |
| 195.54 | 0.654 | 4.39 | -- | 0.255 | -- | -- | -- | -0.224 | 7.09 | -- | -- | -- | -- |
| 150.53 | 0.571 | 4.34 | -- | -- | -1.54 | -- | -- | 0.0127 | -- | 13.22 | 1969 | -- | -- |
| 198.98 | 0.658 | 4.39 | -- | -- | -- | -- | -- | -0.22 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.92 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 3 | 134.86 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 9 | 136.38 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 10 | 136.51 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 11 | 136.54 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 14 | 136.62 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 23 | 137.32 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 24 | 138.07 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 26 | 138.25 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 27 | 138.25 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 28 | 138.27 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 42 | 138.72 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 54 | 139.58 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 59 | 139.77 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 62 | 140.06 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 68 | 140.54 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 70 | 140.68 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 71 | 140.72 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 72 | 140.80 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 78 | 140.94 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 88 | 141.29 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 89 | 141.31 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 17 | 4 |
| 93 | 141.42 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 97 | 141.46 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 101 | 141.48 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 4 | 5 |
| 109 | 141.65 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 115 | 141.69 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 17 | 18 |
| 117 | 141.70 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 133 | 141.80 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 136 | 141.83 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 165 | 141.96 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 184 | 142.00 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 201 | 142.05 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 211 | 142.07 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 20 | 16 |
| 277 | 142.23 | temperature | 15.0 | 1440 | > th | dose dependent | sin | 8 | NA |
| 291 | 142.25 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 442 | 142.61 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 16 | NA |
| 546 | 142.81 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 9 | NA |
| 572 | 142.86 | wind | 9.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 603 | 142.90 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 622 | 142.93 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 643 | 142.96 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 18 | NA |
| 668 | 143.01 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 12 | 20 |
| 706 | 143.06 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 737 | 143.10 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 8 | 19 |
| 782 | 143.15 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 13 | 20 |
| 804 | 143.19 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |