Os11g0212000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NBS-LRR disease resistance protein homologue (Fragment).
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Os11g0212000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NBS-LRR disease resistance protein homologue (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 181.94 | 0.634 | 3.12 | 0.015 | 0.173 | -0.567 | -1.18 | 1.55 | 0.201 | 17.6 | 25.29 | 714 | -- | -- |
| 185.11 | 0.634 | 3.18 | -0.405 | 0.169 | -0.447 | -0.8 | -- | 0.0329 | 16.6 | 25.2 | 711 | -- | -- |
| 185.01 | 0.634 | 3.14 | -0.0559 | 0.138 | -0.529 | -- | 1.37 | 0.169 | 16.8 | 25.4 | 741 | -- | -- |
| 186.77 | 0.637 | 3.17 | -0.428 | 0.176 | -0.449 | -- | -- | 0.0429 | 15.4 | 25.27 | 700 | -- | -- |
| 185.59 | 0.634 | 3.12 | 0.0413 | -- | -0.599 | -- | 1.77 | 0.17 | -- | 25.81 | 905 | -- | -- |
| 193.09 | 0.651 | 3.2 | -0.548 | 0.253 | -- | -0.317 | -- | -0.12 | 12.3 | -- | -- | -- | -- |
| 193.38 | 0.651 | 3.2 | -0.562 | 0.259 | -- | -- | -- | -0.122 | 11.5 | -- | -- | -- | -- |
| 188.14 | 0.639 | 3.17 | -0.43 | -- | -0.461 | -- | -- | 0.0395 | -- | 25.26 | 769 | -- | -- |
| 191.3 | 0.644 | 3.15 | -- | 0.177 | -0.529 | -- | -- | 0.123 | 15.5 | 25.2 | 713 | -- | -- |
| 197.59 | 0.657 | 3.21 | -0.569 | -- | -- | -- | -- | -0.125 | -- | -- | -- | -- | -- |
| 201.7 | 0.664 | 3.19 | -- | 0.265 | -- | -- | -- | -0.0596 | 11.7 | -- | -- | -- | -- |
| 192.73 | 0.647 | 3.16 | -- | -- | -0.547 | -- | -- | 0.114 | -- | 25.3 | 799 | -- | -- |
| 206.12 | 0.67 | 3.2 | -- | -- | -- | -- | -- | -0.0619 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 173.25 | wind | 1 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 2 | 176.23 | wind | 1 | 90 | < th | dose independent | rect. | 8 | 1 |
| 3 | 179.04 | temperature | 30 | 270 | < th | dose dependent | sin | 19 | NA |
| 5 | 179.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 12 |
| 10 | 179.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 8 |
| 11 | 179.84 | temperature | 15 | 270 | > th | dose dependent | sin | 18 | NA |
| 15 | 179.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 12 |
| 17 | 180.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 16 |
| 18 | 180.02 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 14 |
| 22 | 180.11 | temperature | 25 | 720 | < th | dose independent | rect. | 8 | 12 |
| 31 | 180.18 | temperature | 30 | 720 | < th | dose dependent | sin | 23 | NA |
| 33 | 180.19 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 15 |
| 36 | 180.21 | temperature | 20 | 720 | > th | dose dependent | rect. | 10 | 10 |
| 37 | 180.22 | temperature | 25 | 720 | > th | dose independent | sin | 22 | NA |
| 38 | 180.22 | temperature | 25 | 720 | > th | dose independent | rect. | 9 | 11 |
| 39 | 180.22 | radiation | 10 | 90 | < th | dose dependent | rect. | 8 | 2 |
| 59 | 180.31 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 14 |
| 71 | 180.38 | temperature | 20 | 720 | > th | dose dependent | sin | 21 | NA |
| 75 | 180.40 | temperature | 10 | 720 | > th | dose dependent | sin | 22 | NA |
| 99 | 180.54 | temperature | 25 | 720 | < th | dose independent | rect. | 4 | 16 |
| 107 | 180.58 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 14 |
| 142 | 180.70 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 13 | 15 |
| 183 | 180.87 | temperature | 25 | 720 | < th | dose independent | sin | 22 | NA |
| 283 | 181.19 | atmosphere | 1010 | 720 | < th | dose dependent | rect. | 10 | 13 |
| 452 | 181.61 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 10 |
| 458 | 181.63 | atmosphere | 1010 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 488 | 181.68 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 21 | 2 |
| 495 | 181.69 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 8 |
| 505 | 181.73 | atmosphere | 1010 | 720 | < th | dose dependent | sin | 19 | NA |
| 517 | 181.76 | temperature | 20 | 270 | < th | dose independent | rect. | 19 | 1 |
| 539 | 181.81 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 3 |
| 561 | 181.85 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 1 |
| 562 | 181.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 563 | 181.85 | atmosphere | 1000 | 720 | > th | dose dependent | rect. | 8 | 12 |
| 584 | 181.90 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 10 | 6 |
| 595 | 181.92 | temperature | 25 | 720 | > th | dose independent | rect. | 14 | 5 |
| 598 | 181.92 | atmosphere | 1010 | 270 | < th | dose dependent | sin | 16 | NA |
| 602 | 181.93 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 10 | 10 |
| 619 | 181.98 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 14 |
| 682 | 182.07 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 8 | 16 |
| 690 | 182.09 | temperature | 25 | 720 | < th | dose independent | rect. | 23 | 21 |
| 691 | 182.09 | temperature | 20 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 829 | 182.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 1 |
| 850 | 182.36 | atmosphere | 1010 | 720 | < th | dose dependent | rect. | 13 | 6 |
| 878 | 182.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 3 |
| 884 | 182.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 22 |
| 901 | 182.43 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 14 |
| 940 | 182.49 | humidity | 80 | 30 | > th | dose dependent | rect. | 9 | 1 |